Gene : ATCG00420 A. thaliana TAIR10
Defline:  (1 of 1) K05581 - NAD(P)H-quinone oxidoreductase subunit J (ndhJ) Genomic Order:  24
Name:  ? ATCG00420 Secondary Identifier:  ? PAC:19637954
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00420 0.5kb upstream 0.5kb upstream 977 true ChrC: 48677-49653 Arabidopsis thaliana
ATCG00420 0.5kb upstream 0.5kb upstream 500 false ChrC: 49154-49653 Arabidopsis thaliana
ATCG00420 0.5kb downstream 0.5kb downstream 977 true ChrC: 48177-49153 Arabidopsis thaliana
ATCG00420 0.5kb downstream 0.5kb downstream 500 false ChrC: 48177-48676 Arabidopsis thaliana
ATCG00420 1.0kb upstream 1.0kb upstream 1477 true ChrC: 48677-50153 Arabidopsis thaliana
ATCG00420 1.0kb upstream 1.0kb upstream 1000 false ChrC: 49154-50153 Arabidopsis thaliana
ATCG00420 1.0kb downstream 1.0kb downstream 1477 true ChrC: 47677-49153 Arabidopsis thaliana
ATCG00420 1.0kb downstream 1.0kb downstream 1000 false ChrC: 47677-48676 Arabidopsis thaliana
ATCG00420 2.0kb upstream 2.0kb upstream 2477 true ChrC: 48677-51153 Arabidopsis thaliana
ATCG00420 2.0kb upstream 2.0kb upstream 2000 false ChrC: 49154-51153 Arabidopsis thaliana
ATCG00420 2.0kb downstream 2.0kb downstream 2477 true ChrC: 46677-49153 Arabidopsis thaliana
ATCG00420 2.0kb downstream 2.0kb downstream 2000 false ChrC: 46677-48676 Arabidopsis thaliana
ATCG00420 5.0kb upstream 5.0kb upstream 5477 true ChrC: 48677-54153 Arabidopsis thaliana
ATCG00420 5.0kb upstream 5.0kb upstream 5000 false ChrC: 49154-54153 Arabidopsis thaliana
ATCG00420 5.0kb downstream 5.0kb downstream 5477 true ChrC: 43677-49153 Arabidopsis thaliana
ATCG00420 5.0kb downstream 5.0kb downstream 5000 false ChrC: 43677-48676 Arabidopsis thaliana
ATCG00420 10.0kb upstream 10.0kb upstream 10477 true ChrC: 48677-59153 Arabidopsis thaliana
ATCG00420 10.0kb upstream 10.0kb upstream 10000 false ChrC: 49154-59153 Arabidopsis thaliana
ATCG00420 10.0kb downstream 10.0kb downstream 10477 true ChrC: 38677-49153 Arabidopsis thaliana
ATCG00420 10.0kb downstream 10.0kb downstream 10000 false ChrC: 38677-48676 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377567 5261 Brassicaceae View MSA
123835812 5264 Brassicales-Malvales View MSA
124322092 5266 SBM View MSA
124245160 5268 Malvidae View MSA
124050410 5270 Rosid View MSA
123753609 5271 Pentapetalae View MSA
122797515 5272 Eudicot View MSA
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.401        
cufflinks 0.538        
cufflinks 8.332       High
cufflinks 0.461       Low
cufflinks 2.45        
cufflinks 0.687        

0 Strain