Gene : ATCG00440 A. thaliana TAIR10
Defline:  (1 of 1) K05574 - NAD(P)H-quinone oxidoreductase subunit 3 (ndhC) Genomic Order:  26
Name:  ? ATCG00440 Secondary Identifier:  ? PAC:19637990
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00440 0.5kb upstream 0.5kb upstream 863 true ChrC: 50001-50863 Arabidopsis thaliana
ATCG00440 0.5kb upstream 0.5kb upstream 500 false ChrC: 50364-50863 Arabidopsis thaliana
ATCG00440 0.5kb downstream 0.5kb downstream 863 true ChrC: 49501-50363 Arabidopsis thaliana
ATCG00440 0.5kb downstream 0.5kb downstream 500 false ChrC: 49501-50000 Arabidopsis thaliana
ATCG00440 1.0kb upstream 1.0kb upstream 1363 true ChrC: 50001-51363 Arabidopsis thaliana
ATCG00440 1.0kb upstream 1.0kb upstream 1000 false ChrC: 50364-51363 Arabidopsis thaliana
ATCG00440 1.0kb downstream 1.0kb downstream 1363 true ChrC: 49001-50363 Arabidopsis thaliana
ATCG00440 1.0kb downstream 1.0kb downstream 1000 false ChrC: 49001-50000 Arabidopsis thaliana
ATCG00440 2.0kb upstream 2.0kb upstream 2363 true ChrC: 50001-52363 Arabidopsis thaliana
ATCG00440 2.0kb upstream 2.0kb upstream 2000 false ChrC: 50364-52363 Arabidopsis thaliana
ATCG00440 2.0kb downstream 2.0kb downstream 2363 true ChrC: 48001-50363 Arabidopsis thaliana
ATCG00440 2.0kb downstream 2.0kb downstream 2000 false ChrC: 48001-50000 Arabidopsis thaliana
ATCG00440 5.0kb upstream 5.0kb upstream 5363 true ChrC: 50001-55363 Arabidopsis thaliana
ATCG00440 5.0kb upstream 5.0kb upstream 5000 false ChrC: 50364-55363 Arabidopsis thaliana
ATCG00440 5.0kb downstream 5.0kb downstream 5363 true ChrC: 45001-50363 Arabidopsis thaliana
ATCG00440 5.0kb downstream 5.0kb downstream 5000 false ChrC: 45001-50000 Arabidopsis thaliana
ATCG00440 10.0kb upstream 10.0kb upstream 10363 true ChrC: 50001-60363 Arabidopsis thaliana
ATCG00440 10.0kb upstream 10.0kb upstream 10000 false ChrC: 50364-60363 Arabidopsis thaliana
ATCG00440 10.0kb downstream 10.0kb downstream 10363 true ChrC: 40001-50363 Arabidopsis thaliana
ATCG00440 10.0kb downstream 10.0kb downstream 10000 false ChrC: 40001-50000 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029225 5273 Angiosperm View MSA
122376935 5261 Brassicaceae View MSA
123835734 5264 Brassicales-Malvales View MSA
124322083 5266 SBM View MSA
124250160 5268 Malvidae View MSA
124071539 5270 Rosid View MSA
123743152 5271 Pentapetalae View MSA
122792621 5272 Eudicot View MSA
121348446 5274 Embryophyte View MSA
123425081 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.921        
cufflinks 0.457        
cufflinks 7.547       High
cufflinks 0.191     Low Low
cufflinks 2.143        
cufflinks 0.556        

0 Strain