Gene : ATCG00520 A. thaliana TAIR10
Defline:  (1 of 1) PF02392 - Ycf4 (Ycf4) Genomic Order:  32
Name:  ? ATCG00520 Secondary Identifier:  ? PAC:19637971
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00520 0.5kb upstream 0.5kb upstream 1055 true ChrC: 59272-60326 Arabidopsis thaliana
ATCG00520 0.5kb upstream 0.5kb upstream 500 false ChrC: 59272-59771 Arabidopsis thaliana
ATCG00520 0.5kb downstream 0.5kb downstream 1055 true ChrC: 59772-60826 Arabidopsis thaliana
ATCG00520 0.5kb downstream 0.5kb downstream 500 false ChrC: 60327-60826 Arabidopsis thaliana
ATCG00520 1.0kb upstream 1.0kb upstream 1555 true ChrC: 58772-60326 Arabidopsis thaliana
ATCG00520 1.0kb upstream 1.0kb upstream 1000 false ChrC: 58772-59771 Arabidopsis thaliana
ATCG00520 1.0kb downstream 1.0kb downstream 1555 true ChrC: 59772-61326 Arabidopsis thaliana
ATCG00520 1.0kb downstream 1.0kb downstream 1000 false ChrC: 60327-61326 Arabidopsis thaliana
ATCG00520 2.0kb upstream 2.0kb upstream 2555 true ChrC: 57772-60326 Arabidopsis thaliana
ATCG00520 2.0kb upstream 2.0kb upstream 2000 false ChrC: 57772-59771 Arabidopsis thaliana
ATCG00520 2.0kb downstream 2.0kb downstream 2555 true ChrC: 59772-62326 Arabidopsis thaliana
ATCG00520 2.0kb downstream 2.0kb downstream 2000 false ChrC: 60327-62326 Arabidopsis thaliana
ATCG00520 5.0kb upstream 5.0kb upstream 5555 true ChrC: 54772-60326 Arabidopsis thaliana
ATCG00520 5.0kb upstream 5.0kb upstream 5000 false ChrC: 54772-59771 Arabidopsis thaliana
ATCG00520 5.0kb downstream 5.0kb downstream 5555 true ChrC: 59772-65326 Arabidopsis thaliana
ATCG00520 5.0kb downstream 5.0kb downstream 5000 false ChrC: 60327-65326 Arabidopsis thaliana
ATCG00520 10.0kb upstream 10.0kb upstream 10555 true ChrC: 49772-60326 Arabidopsis thaliana
ATCG00520 10.0kb upstream 10.0kb upstream 10000 false ChrC: 49772-59771 Arabidopsis thaliana
ATCG00520 10.0kb downstream 10.0kb downstream 10555 true ChrC: 59772-70326 Arabidopsis thaliana
ATCG00520 10.0kb downstream 10.0kb downstream 10000 false ChrC: 60327-70326 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361578 5261 Brassicaceae View MSA
123840946 5264 Brassicales-Malvales View MSA
124322806 5266 SBM View MSA
124254658 5268 Malvidae View MSA
124065703 5270 Rosid View MSA
123751947 5271 Pentapetalae View MSA
122797651 5272 Eudicot View MSA
122050822 5273 Angiosperm View MSA
121312149 5274 Embryophyte View MSA
123425447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.144        
cufflinks 2.097       Low
cufflinks 33.082     High High
cufflinks 2.448        
cufflinks 5.24        
cufflinks 8.104        

0 Strain