Gene : ATCG00530 A. thaliana TAIR10
Defline:  (1 of 2) PF03040 - CemA family (CemA) Genomic Order:  33
Name:  ? ATCG00530 Secondary Identifier:  ? PAC:19638034
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00530 0.5kb upstream 0.5kb upstream 1190 true ChrC: 60241-61430 Arabidopsis thaliana
ATCG00530 0.5kb upstream 0.5kb upstream 500 false ChrC: 60241-60740 Arabidopsis thaliana
ATCG00530 0.5kb downstream 0.5kb downstream 1190 true ChrC: 60741-61930 Arabidopsis thaliana
ATCG00530 0.5kb downstream 0.5kb downstream 500 false ChrC: 61431-61930 Arabidopsis thaliana
ATCG00530 1.0kb upstream 1.0kb upstream 1690 true ChrC: 59741-61430 Arabidopsis thaliana
ATCG00530 1.0kb upstream 1.0kb upstream 1000 false ChrC: 59741-60740 Arabidopsis thaliana
ATCG00530 1.0kb downstream 1.0kb downstream 1690 true ChrC: 60741-62430 Arabidopsis thaliana
ATCG00530 1.0kb downstream 1.0kb downstream 1000 false ChrC: 61431-62430 Arabidopsis thaliana
ATCG00530 2.0kb upstream 2.0kb upstream 2690 true ChrC: 58741-61430 Arabidopsis thaliana
ATCG00530 2.0kb upstream 2.0kb upstream 2000 false ChrC: 58741-60740 Arabidopsis thaliana
ATCG00530 2.0kb downstream 2.0kb downstream 2690 true ChrC: 60741-63430 Arabidopsis thaliana
ATCG00530 2.0kb downstream 2.0kb downstream 2000 false ChrC: 61431-63430 Arabidopsis thaliana
ATCG00530 5.0kb upstream 5.0kb upstream 5690 true ChrC: 55741-61430 Arabidopsis thaliana
ATCG00530 5.0kb upstream 5.0kb upstream 5000 false ChrC: 55741-60740 Arabidopsis thaliana
ATCG00530 5.0kb downstream 5.0kb downstream 5690 true ChrC: 60741-66430 Arabidopsis thaliana
ATCG00530 5.0kb downstream 5.0kb downstream 5000 false ChrC: 61431-66430 Arabidopsis thaliana
ATCG00530 10.0kb upstream 10.0kb upstream 10690 true ChrC: 50741-61430 Arabidopsis thaliana
ATCG00530 10.0kb upstream 10.0kb upstream 10000 false ChrC: 50741-60740 Arabidopsis thaliana
ATCG00530 10.0kb downstream 10.0kb downstream 10690 true ChrC: 60741-71430 Arabidopsis thaliana
ATCG00530 10.0kb downstream 10.0kb downstream 10000 false ChrC: 61431-71430 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029220 5273 Angiosperm View MSA
122377819 5261 Brassicaceae View MSA
123829506 5264 Brassicales-Malvales View MSA
124350422 5266 SBM View MSA
124244933 5268 Malvidae View MSA
124074488 5270 Rosid View MSA
123751170 5271 Pentapetalae View MSA
122789805 5272 Eudicot View MSA
121346072 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.876        
cufflinks 1.778       Low
cufflinks 41.82     High High
cufflinks 1.503       Low
cufflinks 10.764        
cufflinks 7.173        

0 Strain