Gene : ATCG00070 A. thaliana TAIR10
Defline:  (1 of 1) K02712 - photosystem II PsbK protein (psbK) Genomic Order:  4
Name:  ? ATCG00070 Secondary Identifier:  ? PAC:19637972
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00070 0.5kb upstream 0.5kb upstream 686 true ChrC: 6517-7202 Arabidopsis thaliana
ATCG00070 0.5kb upstream 0.5kb upstream 500 false ChrC: 6517-7016 Arabidopsis thaliana
ATCG00070 0.5kb downstream 0.5kb downstream 686 true ChrC: 7017-7702 Arabidopsis thaliana
ATCG00070 0.5kb downstream 0.5kb downstream 500 false ChrC: 7203-7702 Arabidopsis thaliana
ATCG00070 1.0kb upstream 1.0kb upstream 1186 true ChrC: 6017-7202 Arabidopsis thaliana
ATCG00070 1.0kb upstream 1.0kb upstream 1000 false ChrC: 6017-7016 Arabidopsis thaliana
ATCG00070 1.0kb downstream 1.0kb downstream 1186 true ChrC: 7017-8202 Arabidopsis thaliana
ATCG00070 1.0kb downstream 1.0kb downstream 1000 false ChrC: 7203-8202 Arabidopsis thaliana
ATCG00070 2.0kb upstream 2.0kb upstream 2186 true ChrC: 5017-7202 Arabidopsis thaliana
ATCG00070 2.0kb upstream 2.0kb upstream 2000 false ChrC: 5017-7016 Arabidopsis thaliana
ATCG00070 2.0kb downstream 2.0kb downstream 2186 true ChrC: 7017-9202 Arabidopsis thaliana
ATCG00070 2.0kb downstream 2.0kb downstream 2000 false ChrC: 7203-9202 Arabidopsis thaliana
ATCG00070 5.0kb upstream 5.0kb upstream 5186 true ChrC: 2017-7202 Arabidopsis thaliana
ATCG00070 5.0kb upstream 5.0kb upstream 5000 false ChrC: 2017-7016 Arabidopsis thaliana
ATCG00070 5.0kb downstream 5.0kb downstream 5186 true ChrC: 7017-12202 Arabidopsis thaliana
ATCG00070 5.0kb downstream 5.0kb downstream 5000 false ChrC: 7203-12202 Arabidopsis thaliana
ATCG00070 10.0kb upstream 10.0kb upstream 7202 true ChrC: 1-7202 Arabidopsis thaliana
ATCG00070 10.0kb upstream 10.0kb upstream 7016 false ChrC: 1-7016 Arabidopsis thaliana
ATCG00070 10.0kb downstream 10.0kb downstream 10186 true ChrC: 7017-17202 Arabidopsis thaliana
ATCG00070 10.0kb downstream 10.0kb downstream 10000 false ChrC: 7203-17202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027256 5273 Angiosperm View MSA
122331528 5261 Brassicaceae Singleton cluster - no MSA
123836652 5264 Brassicales-Malvales View MSA
124322190 5266 SBM View MSA
124254494 5268 Malvidae View MSA
124037971 5270 Rosid View MSA
123744134 5271 Pentapetalae View MSA
122797733 5272 Eudicot View MSA
121296936 5274 Embryophyte View MSA
123426665 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.256        
cufflinks 2.51        
cufflinks 80.621     High High
cufflinks 2.219        
cufflinks 19.853        
cufflinks 3.546        

0 Strain