Gene : AT5G67411 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31636:SF51 - SCARECROW-LIKE PROTEIN 32 Genomic Order:  6295
Name:  ? AT5G67411 Secondary Identifier:  ? PAC:19670592
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67411 0.5kb upstream 0.5kb upstream 1197 true Chr5: 26898401-26899597 Arabidopsis thaliana
AT5G67411 0.5kb upstream 0.5kb upstream 500 false Chr5: 26899098-26899597 Arabidopsis thaliana
AT5G67411 0.5kb downstream 0.5kb downstream 1197 true Chr5: 26897901-26899097 Arabidopsis thaliana
AT5G67411 0.5kb downstream 0.5kb downstream 500 false Chr5: 26897901-26898400 Arabidopsis thaliana
AT5G67411 1.0kb upstream 1.0kb upstream 1697 true Chr5: 26898401-26900097 Arabidopsis thaliana
AT5G67411 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26899098-26900097 Arabidopsis thaliana
AT5G67411 1.0kb downstream 1.0kb downstream 1697 true Chr5: 26897401-26899097 Arabidopsis thaliana
AT5G67411 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26897401-26898400 Arabidopsis thaliana
AT5G67411 2.0kb upstream 2.0kb upstream 2697 true Chr5: 26898401-26901097 Arabidopsis thaliana
AT5G67411 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26899098-26901097 Arabidopsis thaliana
AT5G67411 2.0kb downstream 2.0kb downstream 2697 true Chr5: 26896401-26899097 Arabidopsis thaliana
AT5G67411 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26896401-26898400 Arabidopsis thaliana
AT5G67411 5.0kb upstream 5.0kb upstream 5697 true Chr5: 26898401-26904097 Arabidopsis thaliana
AT5G67411 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26899098-26904097 Arabidopsis thaliana
AT5G67411 5.0kb downstream 5.0kb downstream 5697 true Chr5: 26893401-26899097 Arabidopsis thaliana
AT5G67411 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26893401-26898400 Arabidopsis thaliana
AT5G67411 10.0kb upstream 10.0kb upstream 10697 true Chr5: 26898401-26909097 Arabidopsis thaliana
AT5G67411 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26899098-26909097 Arabidopsis thaliana
AT5G67411 10.0kb downstream 10.0kb downstream 10697 true Chr5: 26888401-26899097 Arabidopsis thaliana
AT5G67411 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26888401-26898400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331308 5261 Brassicaceae Singleton cluster - no MSA
123772503 5264 Brassicales-Malvales Singleton cluster - no MSA
124271015 5266 SBM Singleton cluster - no MSA
124247907 5268 Malvidae View MSA
124073977 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain