Gene : BT4 A. thaliana TAIR10
Primary Identifier:  ? AT5G67480 Defline:  (1 of 2) PTHR24413:SF129 - BTB AND MATH DOMAIN-CONTAINING PROTEIN 42
Genomic Order:  6302 Name:  ? AT5G67480
Secondary Identifier:  ? PAC:19667255
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67480 0.5kb upstream 0.5kb upstream 2655 true Chr5: 26930939-26933593 Arabidopsis thaliana
AT5G67480 0.5kb upstream 0.5kb upstream 500 false Chr5: 26933094-26933593 Arabidopsis thaliana
AT5G67480 0.5kb downstream 0.5kb downstream 2655 true Chr5: 26930439-26933093 Arabidopsis thaliana
AT5G67480 0.5kb downstream 0.5kb downstream 500 false Chr5: 26930439-26930938 Arabidopsis thaliana
AT5G67480 1.0kb upstream 1.0kb upstream 3155 true Chr5: 26930939-26934093 Arabidopsis thaliana
AT5G67480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26933094-26934093 Arabidopsis thaliana
AT5G67480 1.0kb downstream 1.0kb downstream 3155 true Chr5: 26929939-26933093 Arabidopsis thaliana
AT5G67480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26929939-26930938 Arabidopsis thaliana
AT5G67480 2.0kb upstream 2.0kb upstream 4155 true Chr5: 26930939-26935093 Arabidopsis thaliana
AT5G67480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26933094-26935093 Arabidopsis thaliana
AT5G67480 2.0kb downstream 2.0kb downstream 4155 true Chr5: 26928939-26933093 Arabidopsis thaliana
AT5G67480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26928939-26930938 Arabidopsis thaliana
AT5G67480 5.0kb upstream 5.0kb upstream 7155 true Chr5: 26930939-26938093 Arabidopsis thaliana
AT5G67480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26933094-26938093 Arabidopsis thaliana
AT5G67480 5.0kb downstream 5.0kb downstream 7155 true Chr5: 26925939-26933093 Arabidopsis thaliana
AT5G67480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26925939-26930938 Arabidopsis thaliana
AT5G67480 10.0kb upstream 10.0kb upstream 12155 true Chr5: 26930939-26943093 Arabidopsis thaliana
AT5G67480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26933094-26943093 Arabidopsis thaliana
AT5G67480 10.0kb downstream 10.0kb downstream 12155 true Chr5: 26920939-26933093 Arabidopsis thaliana
AT5G67480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26920939-26930938 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361556 5261 Brassicaceae View MSA
123828826 5264 Brassicales-Malvales View MSA
124351155 5266 SBM View MSA
124239550 5268 Malvidae View MSA
124060876 5270 Rosid View MSA
123744257 5271 Pentapetalae View MSA
122792458 5272 Eudicot View MSA
122047166 5273 Angiosperm View MSA
121348143 5274 Embryophyte View MSA
123380742 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.91     High  
cufflinks 16.781        
cufflinks 64.419     High  
cufflinks 20.134        
cufflinks 102.931     High High
cufflinks 13.266       Low

0 Strain