Gene : AT5G67150 A. thaliana TAIR10
Defline:  (1 of 13) 2.3.1.133 - Shikimate O-hydroxycinnamoyltransferase Genomic Order:  6265
Name:  ? AT5G67150 Secondary Identifier:  ? PAC:19671410
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-361 Arabidopsis thaliana pathologic  
Athaliana PWY-6039 Arabidopsis thaliana pathologic  
Athaliana PWY-6040 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67150 0.5kb upstream 0.5kb upstream 2042 true Chr5: 26795771-26797812 Arabidopsis thaliana
AT5G67150 0.5kb upstream 0.5kb upstream 500 false Chr5: 26797313-26797812 Arabidopsis thaliana
AT5G67150 0.5kb downstream 0.5kb downstream 2042 true Chr5: 26795271-26797312 Arabidopsis thaliana
AT5G67150 0.5kb downstream 0.5kb downstream 500 false Chr5: 26795271-26795770 Arabidopsis thaliana
AT5G67150 1.0kb upstream 1.0kb upstream 2542 true Chr5: 26795771-26798312 Arabidopsis thaliana
AT5G67150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26797313-26798312 Arabidopsis thaliana
AT5G67150 1.0kb downstream 1.0kb downstream 2542 true Chr5: 26794771-26797312 Arabidopsis thaliana
AT5G67150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26794771-26795770 Arabidopsis thaliana
AT5G67150 2.0kb upstream 2.0kb upstream 3542 true Chr5: 26795771-26799312 Arabidopsis thaliana
AT5G67150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26797313-26799312 Arabidopsis thaliana
AT5G67150 2.0kb downstream 2.0kb downstream 3542 true Chr5: 26793771-26797312 Arabidopsis thaliana
AT5G67150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26793771-26795770 Arabidopsis thaliana
AT5G67150 5.0kb upstream 5.0kb upstream 6542 true Chr5: 26795771-26802312 Arabidopsis thaliana
AT5G67150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26797313-26802312 Arabidopsis thaliana
AT5G67150 5.0kb downstream 5.0kb downstream 6542 true Chr5: 26790771-26797312 Arabidopsis thaliana
AT5G67150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26790771-26795770 Arabidopsis thaliana
AT5G67150 10.0kb upstream 10.0kb upstream 11542 true Chr5: 26795771-26807312 Arabidopsis thaliana
AT5G67150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26797313-26807312 Arabidopsis thaliana
AT5G67150 10.0kb downstream 10.0kb downstream 11542 true Chr5: 26785771-26797312 Arabidopsis thaliana
AT5G67150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26785771-26795770 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373885 5261 Brassicaceae View MSA
123841407 5264 Brassicales-Malvales View MSA
124349927 5266 SBM View MSA
124250776 5268 Malvidae View MSA
124061050 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.709       Low
cufflinks 12.467        
cufflinks 16.249       High
cufflinks 12.482        
cufflinks 10.544        
cufflinks 9.019        

0 Strain