Gene : IRX14-L A. thaliana TAIR10
Primary Identifier:  ? AT5G67230 Defline:  (1 of 2) PTHR10896//PTHR10896:SF17 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED
Genomic Order:  6273 Name:  ? AT5G67230
Secondary Identifier:  ? PAC:19669476
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5800 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67230 0.5kb upstream 0.5kb upstream 2351 true Chr5: 26821978-26824328 Arabidopsis thaliana
AT5G67230 0.5kb upstream 0.5kb upstream 500 false Chr5: 26821978-26822477 Arabidopsis thaliana
AT5G67230 0.5kb downstream 0.5kb downstream 2351 true Chr5: 26822478-26824828 Arabidopsis thaliana
AT5G67230 0.5kb downstream 0.5kb downstream 500 false Chr5: 26824329-26824828 Arabidopsis thaliana
AT5G67230 1.0kb upstream 1.0kb upstream 2851 true Chr5: 26821478-26824328 Arabidopsis thaliana
AT5G67230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26821478-26822477 Arabidopsis thaliana
AT5G67230 1.0kb downstream 1.0kb downstream 2851 true Chr5: 26822478-26825328 Arabidopsis thaliana
AT5G67230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26824329-26825328 Arabidopsis thaliana
AT5G67230 2.0kb upstream 2.0kb upstream 3851 true Chr5: 26820478-26824328 Arabidopsis thaliana
AT5G67230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26820478-26822477 Arabidopsis thaliana
AT5G67230 2.0kb downstream 2.0kb downstream 3851 true Chr5: 26822478-26826328 Arabidopsis thaliana
AT5G67230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26824329-26826328 Arabidopsis thaliana
AT5G67230 5.0kb upstream 5.0kb upstream 6851 true Chr5: 26817478-26824328 Arabidopsis thaliana
AT5G67230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26817478-26822477 Arabidopsis thaliana
AT5G67230 5.0kb downstream 5.0kb downstream 6851 true Chr5: 26822478-26829328 Arabidopsis thaliana
AT5G67230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26824329-26829328 Arabidopsis thaliana
AT5G67230 10.0kb upstream 10.0kb upstream 11851 true Chr5: 26812478-26824328 Arabidopsis thaliana
AT5G67230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26812478-26822477 Arabidopsis thaliana
AT5G67230 10.0kb downstream 10.0kb downstream 11851 true Chr5: 26822478-26834328 Arabidopsis thaliana
AT5G67230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26824329-26834328 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041384 5273 Angiosperm View MSA
122366648 5261 Brassicaceae View MSA
123840009 5264 Brassicales-Malvales View MSA
124337936 5266 SBM View MSA
124241535 5268 Malvidae View MSA
124066029 5270 Rosid View MSA
123737943 5271 Pentapetalae View MSA
122790258 5272 Eudicot View MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.816       High
cufflinks 1.85       Low
cufflinks 3.538        
cufflinks 2.699        
cufflinks 3.837        
cufflinks 4.246        

0 Strain