Gene : ABA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G67030 Defline:  (1 of 1) K09838 - zeaxanthin epoxidase (ZEP, ABA1)
Genomic Order:  6253 Name:  ? AT5G67030
Secondary Identifier:  ? PAC:19671949
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0 Pathways

Genomics

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Expression

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67030 0.5kb upstream 0.5kb upstream 4227 true Chr5: 26753510-26757736 Arabidopsis thaliana
AT5G67030 0.5kb upstream 0.5kb upstream 500 false Chr5: 26757237-26757736 Arabidopsis thaliana
AT5G67030 0.5kb downstream 0.5kb downstream 4227 true Chr5: 26753010-26757236 Arabidopsis thaliana
AT5G67030 0.5kb downstream 0.5kb downstream 500 false Chr5: 26753010-26753509 Arabidopsis thaliana
AT5G67030 1.0kb upstream 1.0kb upstream 4727 true Chr5: 26753510-26758236 Arabidopsis thaliana
AT5G67030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26757237-26758236 Arabidopsis thaliana
AT5G67030 1.0kb downstream 1.0kb downstream 4727 true Chr5: 26752510-26757236 Arabidopsis thaliana
AT5G67030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26752510-26753509 Arabidopsis thaliana
AT5G67030 2.0kb upstream 2.0kb upstream 5727 true Chr5: 26753510-26759236 Arabidopsis thaliana
AT5G67030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26757237-26759236 Arabidopsis thaliana
AT5G67030 2.0kb downstream 2.0kb downstream 5727 true Chr5: 26751510-26757236 Arabidopsis thaliana
AT5G67030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26751510-26753509 Arabidopsis thaliana
AT5G67030 5.0kb upstream 5.0kb upstream 8727 true Chr5: 26753510-26762236 Arabidopsis thaliana
AT5G67030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26757237-26762236 Arabidopsis thaliana
AT5G67030 5.0kb downstream 5.0kb downstream 8727 true Chr5: 26748510-26757236 Arabidopsis thaliana
AT5G67030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26748510-26753509 Arabidopsis thaliana
AT5G67030 10.0kb upstream 10.0kb upstream 13727 true Chr5: 26753510-26767236 Arabidopsis thaliana
AT5G67030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26757237-26767236 Arabidopsis thaliana
AT5G67030 10.0kb downstream 10.0kb downstream 13727 true Chr5: 26743510-26757236 Arabidopsis thaliana
AT5G67030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26743510-26753509 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360864 5261 Brassicaceae View MSA
123829725 5264 Brassicales-Malvales View MSA
124345050 5266 SBM View MSA
124242110 5268 Malvidae View MSA
124062370 5270 Rosid View MSA
123738980 5271 Pentapetalae View MSA
122793592 5272 Eudicot View MSA
122051676 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349162 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.354        
cufflinks 4.397        
cufflinks 28.048     High  
cufflinks 6.417        
cufflinks 52.29     High High
cufflinks 2.581       Low

0 Strain