Gene : AT5G66770 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31636//PTHR31636:SF65 - FAMILY NOT NAMED // SCARECROW-LIKE PROTEIN 4-RELATED Genomic Order:  6224
Name:  ? AT5G66770 Secondary Identifier:  ? PAC:19667797
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66770 0.5kb upstream 0.5kb upstream 2795 true Chr5: 26660100-26662894 Arabidopsis thaliana
AT5G66770 0.5kb upstream 0.5kb upstream 500 false Chr5: 26660100-26660599 Arabidopsis thaliana
AT5G66770 0.5kb downstream 0.5kb downstream 2795 true Chr5: 26660600-26663394 Arabidopsis thaliana
AT5G66770 0.5kb downstream 0.5kb downstream 500 false Chr5: 26662895-26663394 Arabidopsis thaliana
AT5G66770 1.0kb upstream 1.0kb upstream 3295 true Chr5: 26659600-26662894 Arabidopsis thaliana
AT5G66770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26659600-26660599 Arabidopsis thaliana
AT5G66770 1.0kb downstream 1.0kb downstream 3295 true Chr5: 26660600-26663894 Arabidopsis thaliana
AT5G66770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26662895-26663894 Arabidopsis thaliana
AT5G66770 2.0kb upstream 2.0kb upstream 4295 true Chr5: 26658600-26662894 Arabidopsis thaliana
AT5G66770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26658600-26660599 Arabidopsis thaliana
AT5G66770 2.0kb downstream 2.0kb downstream 4295 true Chr5: 26660600-26664894 Arabidopsis thaliana
AT5G66770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26662895-26664894 Arabidopsis thaliana
AT5G66770 5.0kb upstream 5.0kb upstream 7295 true Chr5: 26655600-26662894 Arabidopsis thaliana
AT5G66770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26655600-26660599 Arabidopsis thaliana
AT5G66770 5.0kb downstream 5.0kb downstream 7295 true Chr5: 26660600-26667894 Arabidopsis thaliana
AT5G66770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26662895-26667894 Arabidopsis thaliana
AT5G66770 10.0kb upstream 10.0kb upstream 12295 true Chr5: 26650600-26662894 Arabidopsis thaliana
AT5G66770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26650600-26660599 Arabidopsis thaliana
AT5G66770 10.0kb downstream 10.0kb downstream 12295 true Chr5: 26660600-26672894 Arabidopsis thaliana
AT5G66770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26662895-26672894 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381519 5261 Brassicaceae View MSA
123835492 5264 Brassicales-Malvales View MSA
124344748 5266 SBM View MSA
124244244 5268 Malvidae View MSA
124066285 5270 Rosid View MSA
123739622 5271 Pentapetalae View MSA
122786764 5272 Eudicot View MSA
122043818 5273 Angiosperm View MSA
121346051 5274 Embryophyte View MSA
123380313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.626        
cufflinks 6.298        
cufflinks 3.098        
cufflinks 7.907        
cufflinks 2.577       Low
cufflinks 8.396       High

0 Strain