Gene : CHR1 A. thaliana TAIR10
Primary Identifier:  ? AT5G66750 Defline:  (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1)
Genomic Order:  6222 Name:  ? AT5G66750
Secondary Identifier:  ? PAC:19668720
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0 Pathways

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Expression

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66750 0.5kb upstream 0.5kb upstream 4623 true Chr5: 26648451-26653073 Arabidopsis thaliana
AT5G66750 0.5kb upstream 0.5kb upstream 500 false Chr5: 26648451-26648950 Arabidopsis thaliana
AT5G66750 0.5kb downstream 0.5kb downstream 4623 true Chr5: 26648951-26653573 Arabidopsis thaliana
AT5G66750 0.5kb downstream 0.5kb downstream 500 false Chr5: 26653074-26653573 Arabidopsis thaliana
AT5G66750 1.0kb upstream 1.0kb upstream 5123 true Chr5: 26647951-26653073 Arabidopsis thaliana
AT5G66750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26647951-26648950 Arabidopsis thaliana
AT5G66750 1.0kb downstream 1.0kb downstream 5123 true Chr5: 26648951-26654073 Arabidopsis thaliana
AT5G66750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26653074-26654073 Arabidopsis thaliana
AT5G66750 2.0kb upstream 2.0kb upstream 6123 true Chr5: 26646951-26653073 Arabidopsis thaliana
AT5G66750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26646951-26648950 Arabidopsis thaliana
AT5G66750 2.0kb downstream 2.0kb downstream 6123 true Chr5: 26648951-26655073 Arabidopsis thaliana
AT5G66750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26653074-26655073 Arabidopsis thaliana
AT5G66750 5.0kb upstream 5.0kb upstream 9123 true Chr5: 26643951-26653073 Arabidopsis thaliana
AT5G66750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26643951-26648950 Arabidopsis thaliana
AT5G66750 5.0kb downstream 5.0kb downstream 9123 true Chr5: 26648951-26658073 Arabidopsis thaliana
AT5G66750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26653074-26658073 Arabidopsis thaliana
AT5G66750 10.0kb upstream 10.0kb upstream 14123 true Chr5: 26638951-26653073 Arabidopsis thaliana
AT5G66750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26638951-26648950 Arabidopsis thaliana
AT5G66750 10.0kb downstream 10.0kb downstream 14123 true Chr5: 26648951-26663073 Arabidopsis thaliana
AT5G66750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26653074-26663073 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376500 5261 Brassicaceae View MSA
123839569 5264 Brassicales-Malvales View MSA
124338420 5266 SBM View MSA
124246607 5268 Malvidae View MSA
124067846 5270 Rosid View MSA
123741401 5271 Pentapetalae View MSA
122792521 5272 Eudicot View MSA
122043835 5273 Angiosperm View MSA
121346038 5274 Embryophyte View MSA
123424281 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.569        
cufflinks 6.705        
cufflinks 1.796        
cufflinks 5.876        
cufflinks 1.41       Low
cufflinks 8.246       High

0 Strain