Gene : AT5G66830 A. thaliana TAIR10
Defline:  (1 of 33) PTHR20995//PTHR20995:SF21 - FAMILY NOT NAMED // F-BOX FAMILY PROTEIN-RELATED Genomic Order:  6232
Name:  ? AT5G66830 Secondary Identifier:  ? PAC:19670837
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66830 0.5kb upstream 0.5kb upstream 1685 true Chr5: 26690804-26692488 Arabidopsis thaliana
AT5G66830 0.5kb upstream 0.5kb upstream 500 false Chr5: 26690804-26691303 Arabidopsis thaliana
AT5G66830 0.5kb downstream 0.5kb downstream 1685 true Chr5: 26691304-26692988 Arabidopsis thaliana
AT5G66830 0.5kb downstream 0.5kb downstream 500 false Chr5: 26692489-26692988 Arabidopsis thaliana
AT5G66830 1.0kb upstream 1.0kb upstream 2185 true Chr5: 26690304-26692488 Arabidopsis thaliana
AT5G66830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26690304-26691303 Arabidopsis thaliana
AT5G66830 1.0kb downstream 1.0kb downstream 2185 true Chr5: 26691304-26693488 Arabidopsis thaliana
AT5G66830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26692489-26693488 Arabidopsis thaliana
AT5G66830 2.0kb upstream 2.0kb upstream 3185 true Chr5: 26689304-26692488 Arabidopsis thaliana
AT5G66830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26689304-26691303 Arabidopsis thaliana
AT5G66830 2.0kb downstream 2.0kb downstream 3185 true Chr5: 26691304-26694488 Arabidopsis thaliana
AT5G66830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26692489-26694488 Arabidopsis thaliana
AT5G66830 5.0kb upstream 5.0kb upstream 6185 true Chr5: 26686304-26692488 Arabidopsis thaliana
AT5G66830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26686304-26691303 Arabidopsis thaliana
AT5G66830 5.0kb downstream 5.0kb downstream 6185 true Chr5: 26691304-26697488 Arabidopsis thaliana
AT5G66830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26692489-26697488 Arabidopsis thaliana
AT5G66830 10.0kb upstream 10.0kb upstream 11185 true Chr5: 26681304-26692488 Arabidopsis thaliana
AT5G66830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26681304-26691303 Arabidopsis thaliana
AT5G66830 10.0kb downstream 10.0kb downstream 11185 true Chr5: 26691304-26702488 Arabidopsis thaliana
AT5G66830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26692489-26702488 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380308 5261 Brassicaceae View MSA
123802647 5264 Brassicales-Malvales View MSA
124299828 5266 SBM View MSA
124151142 5268 Malvidae View MSA
124074242 5270 Rosid View MSA
123753146 5271 Pentapetalae View MSA
122797944 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104     Low  
cufflinks 0.283     Low  
cufflinks 0.028     Low Low
cufflinks 0.608       High
cufflinks 0.178     Low  
cufflinks 0.451        

0 Strain