Gene : AT5G66720 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  6219
Name:  ? AT5G66720 Secondary Identifier:  ? PAC:19672498
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66720 0.5kb upstream 0.5kb upstream 2527 true Chr5: 26638790-26641316 Arabidopsis thaliana
AT5G66720 0.5kb upstream 0.5kb upstream 500 false Chr5: 26640817-26641316 Arabidopsis thaliana
AT5G66720 0.5kb downstream 0.5kb downstream 2527 true Chr5: 26638290-26640816 Arabidopsis thaliana
AT5G66720 0.5kb downstream 0.5kb downstream 500 false Chr5: 26638290-26638789 Arabidopsis thaliana
AT5G66720 1.0kb upstream 1.0kb upstream 3027 true Chr5: 26638790-26641816 Arabidopsis thaliana
AT5G66720 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26640817-26641816 Arabidopsis thaliana
AT5G66720 1.0kb downstream 1.0kb downstream 3027 true Chr5: 26637790-26640816 Arabidopsis thaliana
AT5G66720 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26637790-26638789 Arabidopsis thaliana
AT5G66720 2.0kb upstream 2.0kb upstream 4027 true Chr5: 26638790-26642816 Arabidopsis thaliana
AT5G66720 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26640817-26642816 Arabidopsis thaliana
AT5G66720 2.0kb downstream 2.0kb downstream 4027 true Chr5: 26636790-26640816 Arabidopsis thaliana
AT5G66720 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26636790-26638789 Arabidopsis thaliana
AT5G66720 5.0kb upstream 5.0kb upstream 7027 true Chr5: 26638790-26645816 Arabidopsis thaliana
AT5G66720 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26640817-26645816 Arabidopsis thaliana
AT5G66720 5.0kb downstream 5.0kb downstream 7027 true Chr5: 26633790-26640816 Arabidopsis thaliana
AT5G66720 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26633790-26638789 Arabidopsis thaliana
AT5G66720 10.0kb upstream 10.0kb upstream 12027 true Chr5: 26638790-26650816 Arabidopsis thaliana
AT5G66720 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26640817-26650816 Arabidopsis thaliana
AT5G66720 10.0kb downstream 10.0kb downstream 12027 true Chr5: 26628790-26640816 Arabidopsis thaliana
AT5G66720 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26628790-26638789 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367892 5261 Brassicaceae View MSA
123835824 5264 Brassicales-Malvales View MSA
124337822 5266 SBM View MSA
124240045 5268 Malvidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.262        
cufflinks 12.594        
cufflinks 21.809       High
cufflinks 13.793        
cufflinks 21.576       High
cufflinks 11.573       Low

0 Strain