Gene : AT5G66730 A. thaliana TAIR10
Defline:  (1 of 4) PTHR10593//PTHR10593:SF31 - SERINE/THREONINE-PROTEIN KINASE RIO // C2H2-LIKE ZINC FINGER PROTEIN-RELATED Genomic Order:  6220
Name:  ? AT5G66730 Secondary Identifier:  ? PAC:19669366
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66730 0.5kb upstream 0.5kb upstream 3251 true Chr5: 26641652-26644902 Arabidopsis thaliana
AT5G66730 0.5kb upstream 0.5kb upstream 500 false Chr5: 26644403-26644902 Arabidopsis thaliana
AT5G66730 0.5kb downstream 0.5kb downstream 3251 true Chr5: 26641152-26644402 Arabidopsis thaliana
AT5G66730 0.5kb downstream 0.5kb downstream 500 false Chr5: 26641152-26641651 Arabidopsis thaliana
AT5G66730 1.0kb upstream 1.0kb upstream 3751 true Chr5: 26641652-26645402 Arabidopsis thaliana
AT5G66730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26644403-26645402 Arabidopsis thaliana
AT5G66730 1.0kb downstream 1.0kb downstream 3751 true Chr5: 26640652-26644402 Arabidopsis thaliana
AT5G66730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26640652-26641651 Arabidopsis thaliana
AT5G66730 2.0kb upstream 2.0kb upstream 4751 true Chr5: 26641652-26646402 Arabidopsis thaliana
AT5G66730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26644403-26646402 Arabidopsis thaliana
AT5G66730 2.0kb downstream 2.0kb downstream 4751 true Chr5: 26639652-26644402 Arabidopsis thaliana
AT5G66730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26639652-26641651 Arabidopsis thaliana
AT5G66730 5.0kb upstream 5.0kb upstream 7751 true Chr5: 26641652-26649402 Arabidopsis thaliana
AT5G66730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26644403-26649402 Arabidopsis thaliana
AT5G66730 5.0kb downstream 5.0kb downstream 7751 true Chr5: 26636652-26644402 Arabidopsis thaliana
AT5G66730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26636652-26641651 Arabidopsis thaliana
AT5G66730 10.0kb upstream 10.0kb upstream 12751 true Chr5: 26641652-26654402 Arabidopsis thaliana
AT5G66730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26644403-26654402 Arabidopsis thaliana
AT5G66730 10.0kb downstream 10.0kb downstream 12751 true Chr5: 26631652-26644402 Arabidopsis thaliana
AT5G66730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26631652-26641651 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368312 5261 Brassicaceae View MSA
123832069 5264 Brassicales-Malvales View MSA
124342932 5266 SBM View MSA
124249788 5268 Malvidae View MSA
124063203 5270 Rosid View MSA
123752422 5271 Pentapetalae View MSA
122797522 5272 Eudicot View MSA
122049366 5273 Angiosperm View MSA
121344195 5274 Embryophyte View MSA
123379996 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.594     High High
cufflinks 27.442        
cufflinks 20.884       Low
cufflinks 30.554     High  
cufflinks 24.347        
cufflinks 25.82        

0 Strain