Gene : AT5G66460 A. thaliana TAIR10
Defline:  (1 of 4) PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Genomic Order:  6189
Name:  ? AT5G66460 Secondary Identifier:  ? PAC:19667695
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66460 0.5kb upstream 0.5kb upstream 3142 true Chr5: 26538395-26541536 Arabidopsis thaliana
AT5G66460 0.5kb upstream 0.5kb upstream 500 false Chr5: 26541037-26541536 Arabidopsis thaliana
AT5G66460 0.5kb downstream 0.5kb downstream 3142 true Chr5: 26537895-26541036 Arabidopsis thaliana
AT5G66460 0.5kb downstream 0.5kb downstream 500 false Chr5: 26537895-26538394 Arabidopsis thaliana
AT5G66460 1.0kb upstream 1.0kb upstream 3642 true Chr5: 26538395-26542036 Arabidopsis thaliana
AT5G66460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26541037-26542036 Arabidopsis thaliana
AT5G66460 1.0kb downstream 1.0kb downstream 3642 true Chr5: 26537395-26541036 Arabidopsis thaliana
AT5G66460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26537395-26538394 Arabidopsis thaliana
AT5G66460 2.0kb upstream 2.0kb upstream 4642 true Chr5: 26538395-26543036 Arabidopsis thaliana
AT5G66460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26541037-26543036 Arabidopsis thaliana
AT5G66460 2.0kb downstream 2.0kb downstream 4642 true Chr5: 26536395-26541036 Arabidopsis thaliana
AT5G66460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26536395-26538394 Arabidopsis thaliana
AT5G66460 5.0kb upstream 5.0kb upstream 7642 true Chr5: 26538395-26546036 Arabidopsis thaliana
AT5G66460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26541037-26546036 Arabidopsis thaliana
AT5G66460 5.0kb downstream 5.0kb downstream 7642 true Chr5: 26533395-26541036 Arabidopsis thaliana
AT5G66460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26533395-26538394 Arabidopsis thaliana
AT5G66460 10.0kb upstream 10.0kb upstream 12642 true Chr5: 26538395-26551036 Arabidopsis thaliana
AT5G66460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26541037-26551036 Arabidopsis thaliana
AT5G66460 10.0kb downstream 10.0kb downstream 12642 true Chr5: 26528395-26541036 Arabidopsis thaliana
AT5G66460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26528395-26538394 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370216 5261 Brassicaceae View MSA
123835557 5264 Brassicales-Malvales View MSA
124347701 5266 SBM View MSA
124239310 5268 Malvidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.533        
cufflinks 18.65        
cufflinks 3.055        
cufflinks 20.395        
cufflinks 3.052        
cufflinks 18.71        

0 Strain