Gene : AT5G66450 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11247//PTHR11247:SF25 - PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 // LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  6188
Name:  ? AT5G66450 Secondary Identifier:  ? PAC:19668477
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRIGLSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66450 0.5kb upstream 0.5kb upstream 1932 true Chr5: 26534114-26536045 Arabidopsis thaliana
AT5G66450 0.5kb upstream 0.5kb upstream 500 false Chr5: 26534114-26534613 Arabidopsis thaliana
AT5G66450 0.5kb downstream 0.5kb downstream 1932 true Chr5: 26534614-26536545 Arabidopsis thaliana
AT5G66450 0.5kb downstream 0.5kb downstream 500 false Chr5: 26536046-26536545 Arabidopsis thaliana
AT5G66450 1.0kb upstream 1.0kb upstream 2432 true Chr5: 26533614-26536045 Arabidopsis thaliana
AT5G66450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26533614-26534613 Arabidopsis thaliana
AT5G66450 1.0kb downstream 1.0kb downstream 2432 true Chr5: 26534614-26537045 Arabidopsis thaliana
AT5G66450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26536046-26537045 Arabidopsis thaliana
AT5G66450 2.0kb upstream 2.0kb upstream 3432 true Chr5: 26532614-26536045 Arabidopsis thaliana
AT5G66450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26532614-26534613 Arabidopsis thaliana
AT5G66450 2.0kb downstream 2.0kb downstream 3432 true Chr5: 26534614-26538045 Arabidopsis thaliana
AT5G66450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26536046-26538045 Arabidopsis thaliana
AT5G66450 5.0kb upstream 5.0kb upstream 6432 true Chr5: 26529614-26536045 Arabidopsis thaliana
AT5G66450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26529614-26534613 Arabidopsis thaliana
AT5G66450 5.0kb downstream 5.0kb downstream 6432 true Chr5: 26534614-26541045 Arabidopsis thaliana
AT5G66450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26536046-26541045 Arabidopsis thaliana
AT5G66450 10.0kb upstream 10.0kb upstream 11432 true Chr5: 26524614-26536045 Arabidopsis thaliana
AT5G66450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26524614-26534613 Arabidopsis thaliana
AT5G66450 10.0kb downstream 10.0kb downstream 11432 true Chr5: 26534614-26546045 Arabidopsis thaliana
AT5G66450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26536046-26546045 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381312 5261 Brassicaceae View MSA
123838864 5264 Brassicales-Malvales View MSA
124340744 5266 SBM View MSA
124241187 5268 Malvidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.597       High
cufflinks 2.098       Low
cufflinks 4.407        
cufflinks 2.351        
cufflinks 3.998        
cufflinks 2.184        

0 Strain