Gene : AT5G66440 A. thaliana TAIR10
Genomic Order:  6187 Name:  ? AT5G66440
Secondary Identifier:  ? PAC:19665369
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66440 0.5kb upstream 0.5kb upstream 1363 true Chr5: 26530235-26531597 Arabidopsis thaliana
AT5G66440 0.5kb upstream 0.5kb upstream 500 false Chr5: 26531098-26531597 Arabidopsis thaliana
AT5G66440 0.5kb downstream 0.5kb downstream 1363 true Chr5: 26529735-26531097 Arabidopsis thaliana
AT5G66440 0.5kb downstream 0.5kb downstream 500 false Chr5: 26529735-26530234 Arabidopsis thaliana
AT5G66440 1.0kb upstream 1.0kb upstream 1863 true Chr5: 26530235-26532097 Arabidopsis thaliana
AT5G66440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26531098-26532097 Arabidopsis thaliana
AT5G66440 1.0kb downstream 1.0kb downstream 1863 true Chr5: 26529235-26531097 Arabidopsis thaliana
AT5G66440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26529235-26530234 Arabidopsis thaliana
AT5G66440 2.0kb upstream 2.0kb upstream 2863 true Chr5: 26530235-26533097 Arabidopsis thaliana
AT5G66440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26531098-26533097 Arabidopsis thaliana
AT5G66440 2.0kb downstream 2.0kb downstream 2863 true Chr5: 26528235-26531097 Arabidopsis thaliana
AT5G66440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26528235-26530234 Arabidopsis thaliana
AT5G66440 5.0kb upstream 5.0kb upstream 5863 true Chr5: 26530235-26536097 Arabidopsis thaliana
AT5G66440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26531098-26536097 Arabidopsis thaliana
AT5G66440 5.0kb downstream 5.0kb downstream 5863 true Chr5: 26525235-26531097 Arabidopsis thaliana
AT5G66440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26525235-26530234 Arabidopsis thaliana
AT5G66440 10.0kb upstream 10.0kb upstream 10863 true Chr5: 26530235-26541097 Arabidopsis thaliana
AT5G66440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26531098-26541097 Arabidopsis thaliana
AT5G66440 10.0kb downstream 10.0kb downstream 10863 true Chr5: 26520235-26531097 Arabidopsis thaliana
AT5G66440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26520235-26530234 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365527 5261 Brassicaceae View MSA
123839151 5264 Brassicales-Malvales View MSA
124322565 5266 SBM View MSA
124253220 5268 Malvidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.959        
cufflinks 17.145        
cufflinks 4.954       Low
cufflinks 23.763       High
cufflinks 6.396        
cufflinks 16.149        

0 Strain