Gene : AT5G66550 A. thaliana TAIR10
Defline:  (1 of 2) K06287 - septum formation protein (maf) Genomic Order:  6198
Name:  ? AT5G66550 Secondary Identifier:  ? PAC:19673213
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66550 0.5kb upstream 0.5kb upstream 2133 true Chr5: 26559584-26561716 Arabidopsis thaliana
AT5G66550 0.5kb upstream 0.5kb upstream 500 false Chr5: 26561217-26561716 Arabidopsis thaliana
AT5G66550 0.5kb downstream 0.5kb downstream 2133 true Chr5: 26559084-26561216 Arabidopsis thaliana
AT5G66550 0.5kb downstream 0.5kb downstream 500 false Chr5: 26559084-26559583 Arabidopsis thaliana
AT5G66550 1.0kb upstream 1.0kb upstream 2633 true Chr5: 26559584-26562216 Arabidopsis thaliana
AT5G66550 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26561217-26562216 Arabidopsis thaliana
AT5G66550 1.0kb downstream 1.0kb downstream 2633 true Chr5: 26558584-26561216 Arabidopsis thaliana
AT5G66550 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26558584-26559583 Arabidopsis thaliana
AT5G66550 2.0kb upstream 2.0kb upstream 3633 true Chr5: 26559584-26563216 Arabidopsis thaliana
AT5G66550 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26561217-26563216 Arabidopsis thaliana
AT5G66550 2.0kb downstream 2.0kb downstream 3633 true Chr5: 26557584-26561216 Arabidopsis thaliana
AT5G66550 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26557584-26559583 Arabidopsis thaliana
AT5G66550 5.0kb upstream 5.0kb upstream 6633 true Chr5: 26559584-26566216 Arabidopsis thaliana
AT5G66550 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26561217-26566216 Arabidopsis thaliana
AT5G66550 5.0kb downstream 5.0kb downstream 6633 true Chr5: 26554584-26561216 Arabidopsis thaliana
AT5G66550 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26554584-26559583 Arabidopsis thaliana
AT5G66550 10.0kb upstream 10.0kb upstream 11633 true Chr5: 26559584-26571216 Arabidopsis thaliana
AT5G66550 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26561217-26571216 Arabidopsis thaliana
AT5G66550 10.0kb downstream 10.0kb downstream 11633 true Chr5: 26549584-26561216 Arabidopsis thaliana
AT5G66550 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26549584-26559583 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365999 5261 Brassicaceae View MSA
123837125 5264 Brassicales-Malvales View MSA
124345222 5266 SBM View MSA
124249803 5268 Malvidae View MSA
124065460 5270 Rosid View MSA
123742079 5271 Pentapetalae View MSA
122790099 5272 Eudicot View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.633       High
cufflinks 6.696        
cufflinks 9.349       High
cufflinks 6.135        
cufflinks 7.138        
cufflinks 6.379        

0 Strain