Gene : ATMG01320 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22773//PTHR22773:SF89 - NADH DEHYDROGENASE // NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2-RELATED Genomic Order:  116
Name:  ? ATMG01320 Secondary Identifier:  ? PAC:19643644
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5083 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG01320 0.5kb upstream 0.5kb upstream 5715 true ChrM: 327891-333605 Arabidopsis thaliana
ATMG01320 0.5kb upstream 0.5kb upstream 500 false ChrM: 333106-333605 Arabidopsis thaliana
ATMG01320 0.5kb downstream 0.5kb downstream 5715 true ChrM: 327391-333105 Arabidopsis thaliana
ATMG01320 0.5kb downstream 0.5kb downstream 500 false ChrM: 327391-327890 Arabidopsis thaliana
ATMG01320 1.0kb upstream 1.0kb upstream 6215 true ChrM: 327891-334105 Arabidopsis thaliana
ATMG01320 1.0kb upstream 1.0kb upstream 1000 false ChrM: 333106-334105 Arabidopsis thaliana
ATMG01320 1.0kb downstream 1.0kb downstream 6215 true ChrM: 326891-333105 Arabidopsis thaliana
ATMG01320 1.0kb downstream 1.0kb downstream 1000 false ChrM: 326891-327890 Arabidopsis thaliana
ATMG01320 2.0kb upstream 2.0kb upstream 7215 true ChrM: 327891-335105 Arabidopsis thaliana
ATMG01320 2.0kb upstream 2.0kb upstream 2000 false ChrM: 333106-335105 Arabidopsis thaliana
ATMG01320 2.0kb downstream 2.0kb downstream 7215 true ChrM: 325891-333105 Arabidopsis thaliana
ATMG01320 2.0kb downstream 2.0kb downstream 2000 false ChrM: 325891-327890 Arabidopsis thaliana
ATMG01320 5.0kb upstream 5.0kb upstream 10215 true ChrM: 327891-338105 Arabidopsis thaliana
ATMG01320 5.0kb upstream 5.0kb upstream 5000 false ChrM: 333106-338105 Arabidopsis thaliana
ATMG01320 5.0kb downstream 5.0kb downstream 10215 true ChrM: 322891-333105 Arabidopsis thaliana
ATMG01320 5.0kb downstream 5.0kb downstream 5000 false ChrM: 322891-327890 Arabidopsis thaliana
ATMG01320 10.0kb upstream 10.0kb upstream 15215 true ChrM: 327891-343105 Arabidopsis thaliana
ATMG01320 10.0kb upstream 10.0kb upstream 10000 false ChrM: 333106-343105 Arabidopsis thaliana
ATMG01320 10.0kb downstream 10.0kb downstream 15215 true ChrM: 317891-333105 Arabidopsis thaliana
ATMG01320 10.0kb downstream 10.0kb downstream 10000 false ChrM: 317891-327890 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783912 5273 Angiosperm View MSA
122331643 5261 Brassicaceae View MSA
123772800 5264 Brassicales-Malvales View MSA
124271307 5266 SBM View MSA
124127304 5268 Malvidae View MSA
123856162 5270 Rosid View MSA
123755703 5271 Pentapetalae View MSA
122776934 5272 Eudicot View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low  
cufflinks 0.009     Low  
cufflinks 0.003     Low  
cufflinks 0.012     Low High
cufflinks 0.002     Low Low
cufflinks 0.012     Low High

0 Strain