Gene : ATMG00980 A. thaliana TAIR10
Defline:  (1 of 5) K02950 - small subunit ribosomal protein S12 (RP-S12, MRPS12, rpsL) Genomic Order:  83
Name:  ? ATMG00980 Secondary Identifier:  ? PAC:19643692
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00980 0.5kb upstream 0.5kb upstream 878 true ChrM: 260224-261101 Arabidopsis thaliana
ATMG00980 0.5kb upstream 0.5kb upstream 500 false ChrM: 260602-261101 Arabidopsis thaliana
ATMG00980 0.5kb downstream 0.5kb downstream 878 true ChrM: 259724-260601 Arabidopsis thaliana
ATMG00980 0.5kb downstream 0.5kb downstream 500 false ChrM: 259724-260223 Arabidopsis thaliana
ATMG00980 1.0kb upstream 1.0kb upstream 1378 true ChrM: 260224-261601 Arabidopsis thaliana
ATMG00980 1.0kb upstream 1.0kb upstream 1000 false ChrM: 260602-261601 Arabidopsis thaliana
ATMG00980 1.0kb downstream 1.0kb downstream 1378 true ChrM: 259224-260601 Arabidopsis thaliana
ATMG00980 1.0kb downstream 1.0kb downstream 1000 false ChrM: 259224-260223 Arabidopsis thaliana
ATMG00980 2.0kb upstream 2.0kb upstream 2378 true ChrM: 260224-262601 Arabidopsis thaliana
ATMG00980 2.0kb upstream 2.0kb upstream 2000 false ChrM: 260602-262601 Arabidopsis thaliana
ATMG00980 2.0kb downstream 2.0kb downstream 2378 true ChrM: 258224-260601 Arabidopsis thaliana
ATMG00980 2.0kb downstream 2.0kb downstream 2000 false ChrM: 258224-260223 Arabidopsis thaliana
ATMG00980 5.0kb upstream 5.0kb upstream 5378 true ChrM: 260224-265601 Arabidopsis thaliana
ATMG00980 5.0kb upstream 5.0kb upstream 5000 false ChrM: 260602-265601 Arabidopsis thaliana
ATMG00980 5.0kb downstream 5.0kb downstream 5378 true ChrM: 255224-260601 Arabidopsis thaliana
ATMG00980 5.0kb downstream 5.0kb downstream 5000 false ChrM: 255224-260223 Arabidopsis thaliana
ATMG00980 10.0kb upstream 10.0kb upstream 10378 true ChrM: 260224-270601 Arabidopsis thaliana
ATMG00980 10.0kb upstream 10.0kb upstream 10000 false ChrM: 260602-270601 Arabidopsis thaliana
ATMG00980 10.0kb downstream 10.0kb downstream 10378 true ChrM: 250224-260601 Arabidopsis thaliana
ATMG00980 10.0kb downstream 10.0kb downstream 10000 false ChrM: 250224-260223 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378883 5261 Brassicaceae View MSA
123835549 5264 Brassicales-Malvales View MSA
124322061 5266 SBM View MSA
124243382 5268 Malvidae View MSA
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.235     Low  
cufflinks 0.164     Low  
cufflinks 0.1     Low  
cufflinks 0.488        
cufflinks 0.072     Low Low
cufflinks 0.951       High

0 Strain