Gene : ATMG00570 A. thaliana TAIR10
Defline:  (1 of 2) PTHR30371 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC Genomic Order:  47
Name:  ? ATMG00570 Secondary Identifier:  ? PAC:19643647
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00570 0.5kb upstream 0.5kb upstream 1361 true ChrM: 156991-158351 Arabidopsis thaliana
ATMG00570 0.5kb upstream 0.5kb upstream 500 false ChrM: 156991-157490 Arabidopsis thaliana
ATMG00570 0.5kb downstream 0.5kb downstream 1361 true ChrM: 157491-158851 Arabidopsis thaliana
ATMG00570 0.5kb downstream 0.5kb downstream 500 false ChrM: 158352-158851 Arabidopsis thaliana
ATMG00570 1.0kb upstream 1.0kb upstream 1861 true ChrM: 156491-158351 Arabidopsis thaliana
ATMG00570 1.0kb upstream 1.0kb upstream 1000 false ChrM: 156491-157490 Arabidopsis thaliana
ATMG00570 1.0kb downstream 1.0kb downstream 1861 true ChrM: 157491-159351 Arabidopsis thaliana
ATMG00570 1.0kb downstream 1.0kb downstream 1000 false ChrM: 158352-159351 Arabidopsis thaliana
ATMG00570 2.0kb upstream 2.0kb upstream 2861 true ChrM: 155491-158351 Arabidopsis thaliana
ATMG00570 2.0kb upstream 2.0kb upstream 2000 false ChrM: 155491-157490 Arabidopsis thaliana
ATMG00570 2.0kb downstream 2.0kb downstream 2861 true ChrM: 157491-160351 Arabidopsis thaliana
ATMG00570 2.0kb downstream 2.0kb downstream 2000 false ChrM: 158352-160351 Arabidopsis thaliana
ATMG00570 5.0kb upstream 5.0kb upstream 5861 true ChrM: 152491-158351 Arabidopsis thaliana
ATMG00570 5.0kb upstream 5.0kb upstream 5000 false ChrM: 152491-157490 Arabidopsis thaliana
ATMG00570 5.0kb downstream 5.0kb downstream 5861 true ChrM: 157491-163351 Arabidopsis thaliana
ATMG00570 5.0kb downstream 5.0kb downstream 5000 false ChrM: 158352-163351 Arabidopsis thaliana
ATMG00570 10.0kb upstream 10.0kb upstream 10861 true ChrM: 147491-158351 Arabidopsis thaliana
ATMG00570 10.0kb upstream 10.0kb upstream 10000 false ChrM: 147491-157490 Arabidopsis thaliana
ATMG00570 10.0kb downstream 10.0kb downstream 10861 true ChrM: 157491-168351 Arabidopsis thaliana
ATMG00570 10.0kb downstream 10.0kb downstream 10000 false ChrM: 158352-168351 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378795 5261 Brassicaceae View MSA
123801995 5264 Brassicales-Malvales View MSA
124299227 5266 SBM View MSA
124247847 5268 Malvidae View MSA
124039149 5270 Rosid View MSA
123743774 5271 Pentapetalae View MSA
122796155 5272 Eudicot View MSA
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.068     Low  
cufflinks 0.28     Low  
cufflinks 0.168     Low  
cufflinks 0.2     Low  
cufflinks 0.026     Low Low
cufflinks 0.651       High

0 Strain