Gene : ATMG00580 A. thaliana TAIR10
Defline:  (1 of 1) K03881 - NADH-ubiquinone oxidoreductase chain 4 (ND4) Genomic Order:  48
Name:  ? ATMG00580 Secondary Identifier:  ? PAC:19643646
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5083 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00580 0.5kb upstream 0.5kb upstream 8482 true ChrM: 161193-169674 Arabidopsis thaliana
ATMG00580 0.5kb upstream 0.5kb upstream 500 false ChrM: 161193-161692 Arabidopsis thaliana
ATMG00580 0.5kb downstream 0.5kb downstream 8482 true ChrM: 161693-170174 Arabidopsis thaliana
ATMG00580 0.5kb downstream 0.5kb downstream 500 false ChrM: 169675-170174 Arabidopsis thaliana
ATMG00580 1.0kb upstream 1.0kb upstream 8982 true ChrM: 160693-169674 Arabidopsis thaliana
ATMG00580 1.0kb upstream 1.0kb upstream 1000 false ChrM: 160693-161692 Arabidopsis thaliana
ATMG00580 1.0kb downstream 1.0kb downstream 8982 true ChrM: 161693-170674 Arabidopsis thaliana
ATMG00580 1.0kb downstream 1.0kb downstream 1000 false ChrM: 169675-170674 Arabidopsis thaliana
ATMG00580 2.0kb upstream 2.0kb upstream 9982 true ChrM: 159693-169674 Arabidopsis thaliana
ATMG00580 2.0kb upstream 2.0kb upstream 2000 false ChrM: 159693-161692 Arabidopsis thaliana
ATMG00580 2.0kb downstream 2.0kb downstream 9982 true ChrM: 161693-171674 Arabidopsis thaliana
ATMG00580 2.0kb downstream 2.0kb downstream 2000 false ChrM: 169675-171674 Arabidopsis thaliana
ATMG00580 5.0kb upstream 5.0kb upstream 12982 true ChrM: 156693-169674 Arabidopsis thaliana
ATMG00580 5.0kb upstream 5.0kb upstream 5000 false ChrM: 156693-161692 Arabidopsis thaliana
ATMG00580 5.0kb downstream 5.0kb downstream 12982 true ChrM: 161693-174674 Arabidopsis thaliana
ATMG00580 5.0kb downstream 5.0kb downstream 5000 false ChrM: 169675-174674 Arabidopsis thaliana
ATMG00580 10.0kb upstream 10.0kb upstream 17982 true ChrM: 151693-169674 Arabidopsis thaliana
ATMG00580 10.0kb upstream 10.0kb upstream 10000 false ChrM: 151693-161692 Arabidopsis thaliana
ATMG00580 10.0kb downstream 10.0kb downstream 17982 true ChrM: 161693-179674 Arabidopsis thaliana
ATMG00580 10.0kb downstream 10.0kb downstream 10000 false ChrM: 169675-179674 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338757 5261 Brassicaceae View MSA
123779303 5264 Brassicales-Malvales View MSA
124277631 5266 SBM View MSA
124252475 5268 Malvidae View MSA
124037990 5270 Rosid View MSA
123751284 5271 Pentapetalae View MSA
122795690 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 0.024     Low  
cufflinks 0.018     Low  
cufflinks 0.006     Low Low
cufflinks 0.068     Low High

0 Strain