Gene : ATMG00665 A. thaliana TAIR10
Defline:  (1 of 3) K03883 - NADH-ubiquinone oxidoreductase chain 5 (ND5) Genomic Order:  57
Name:  ? ATMG00665 Secondary Identifier:  ? PAC:19643643
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5083 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00665 0.5kb upstream 0.5kb upstream 521 true ChrM: 190741-191261 Arabidopsis thaliana
ATMG00665 0.5kb upstream 0.5kb upstream 500 false ChrM: 190762-191261 Arabidopsis thaliana
ATMG00665 0.5kb downstream 0.5kb downstream 521 true ChrM: 190241-190761 Arabidopsis thaliana
ATMG00665 0.5kb downstream 0.5kb downstream 500 false ChrM: 190241-190740 Arabidopsis thaliana
ATMG00665 1.0kb upstream 1.0kb upstream 1021 true ChrM: 190741-191761 Arabidopsis thaliana
ATMG00665 1.0kb upstream 1.0kb upstream 1000 false ChrM: 190762-191761 Arabidopsis thaliana
ATMG00665 1.0kb downstream 1.0kb downstream 1021 true ChrM: 189741-190761 Arabidopsis thaliana
ATMG00665 1.0kb downstream 1.0kb downstream 1000 false ChrM: 189741-190740 Arabidopsis thaliana
ATMG00665 2.0kb upstream 2.0kb upstream 2021 true ChrM: 190741-192761 Arabidopsis thaliana
ATMG00665 2.0kb upstream 2.0kb upstream 2000 false ChrM: 190762-192761 Arabidopsis thaliana
ATMG00665 2.0kb downstream 2.0kb downstream 2021 true ChrM: 188741-190761 Arabidopsis thaliana
ATMG00665 2.0kb downstream 2.0kb downstream 2000 false ChrM: 188741-190740 Arabidopsis thaliana
ATMG00665 5.0kb upstream 5.0kb upstream 5021 true ChrM: 190741-195761 Arabidopsis thaliana
ATMG00665 5.0kb upstream 5.0kb upstream 5000 false ChrM: 190762-195761 Arabidopsis thaliana
ATMG00665 5.0kb downstream 5.0kb downstream 5021 true ChrM: 185741-190761 Arabidopsis thaliana
ATMG00665 5.0kb downstream 5.0kb downstream 5000 false ChrM: 185741-190740 Arabidopsis thaliana
ATMG00665 10.0kb upstream 10.0kb upstream 10021 true ChrM: 190741-200761 Arabidopsis thaliana
ATMG00665 10.0kb upstream 10.0kb upstream 10000 false ChrM: 190762-200761 Arabidopsis thaliana
ATMG00665 10.0kb downstream 10.0kb downstream 10021 true ChrM: 180741-190761 Arabidopsis thaliana
ATMG00665 10.0kb downstream 10.0kb downstream 10000 false ChrM: 180741-190740 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331678 5261 Brassicaceae View MSA
123772833 5264 Brassicales-Malvales View MSA
124271340 5266 SBM View MSA
124127336 5268 Malvidae View MSA
124072992 5270 Rosid View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.745        
cufflinks 8.689        
cufflinks 12.302        
cufflinks 5.199        
cufflinks 4.357       Low
cufflinks 15.738       High

0 Strain