Gene : ATMG00730 A. thaliana TAIR10
Defline:  (1 of 2) K02262 - cytochrome c oxidase subunit 3 (COX3) Genomic Order:  63
Name:  ? ATMG00730 Secondary Identifier:  ? PAC:19643689
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-7279 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00730 0.5kb upstream 0.5kb upstream 1947 true ChrM: 217131-219077 Arabidopsis thaliana
ATMG00730 0.5kb upstream 0.5kb upstream 500 false ChrM: 217131-217630 Arabidopsis thaliana
ATMG00730 0.5kb downstream 0.5kb downstream 1947 true ChrM: 217631-219577 Arabidopsis thaliana
ATMG00730 0.5kb downstream 0.5kb downstream 500 false ChrM: 219078-219577 Arabidopsis thaliana
ATMG00730 1.0kb upstream 1.0kb upstream 2447 true ChrM: 216631-219077 Arabidopsis thaliana
ATMG00730 1.0kb upstream 1.0kb upstream 1000 false ChrM: 216631-217630 Arabidopsis thaliana
ATMG00730 1.0kb downstream 1.0kb downstream 2447 true ChrM: 217631-220077 Arabidopsis thaliana
ATMG00730 1.0kb downstream 1.0kb downstream 1000 false ChrM: 219078-220077 Arabidopsis thaliana
ATMG00730 2.0kb upstream 2.0kb upstream 3447 true ChrM: 215631-219077 Arabidopsis thaliana
ATMG00730 2.0kb upstream 2.0kb upstream 2000 false ChrM: 215631-217630 Arabidopsis thaliana
ATMG00730 2.0kb downstream 2.0kb downstream 3447 true ChrM: 217631-221077 Arabidopsis thaliana
ATMG00730 2.0kb downstream 2.0kb downstream 2000 false ChrM: 219078-221077 Arabidopsis thaliana
ATMG00730 5.0kb upstream 5.0kb upstream 6447 true ChrM: 212631-219077 Arabidopsis thaliana
ATMG00730 5.0kb upstream 5.0kb upstream 5000 false ChrM: 212631-217630 Arabidopsis thaliana
ATMG00730 5.0kb downstream 5.0kb downstream 6447 true ChrM: 217631-224077 Arabidopsis thaliana
ATMG00730 5.0kb downstream 5.0kb downstream 5000 false ChrM: 219078-224077 Arabidopsis thaliana
ATMG00730 10.0kb upstream 10.0kb upstream 11447 true ChrM: 207631-219077 Arabidopsis thaliana
ATMG00730 10.0kb upstream 10.0kb upstream 10000 false ChrM: 207631-217630 Arabidopsis thaliana
ATMG00730 10.0kb downstream 10.0kb downstream 11447 true ChrM: 217631-229077 Arabidopsis thaliana
ATMG00730 10.0kb downstream 10.0kb downstream 10000 false ChrM: 219078-229077 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375680 5261 Brassicaceae View MSA
123835070 5264 Brassicales-Malvales View MSA
124322001 5266 SBM View MSA
124245216 5268 Malvidae View MSA
124037306 5270 Rosid View MSA
123753546 5271 Pentapetalae View MSA
122786162 5272 Eudicot View MSA
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low Low
cufflinks 0.064     Low  
cufflinks 0.105     Low  
cufflinks 0.076     Low  
cufflinks 0.06     Low  
cufflinks 0.237     Low High

0 Strain