Gene : ATMG00480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR36816:SF1 - ATP SYNTHASE PROTEIN YMF19 Genomic Order:  36
Name:  ? ATMG00480 Secondary Identifier:  ? PAC:19643687
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-7219 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00480 0.5kb upstream 0.5kb upstream 977 true ChrM: 129409-130385 Arabidopsis thaliana
ATMG00480 0.5kb upstream 0.5kb upstream 500 false ChrM: 129409-129908 Arabidopsis thaliana
ATMG00480 0.5kb downstream 0.5kb downstream 977 true ChrM: 129909-130885 Arabidopsis thaliana
ATMG00480 0.5kb downstream 0.5kb downstream 500 false ChrM: 130386-130885 Arabidopsis thaliana
ATMG00480 1.0kb upstream 1.0kb upstream 1477 true ChrM: 128909-130385 Arabidopsis thaliana
ATMG00480 1.0kb upstream 1.0kb upstream 1000 false ChrM: 128909-129908 Arabidopsis thaliana
ATMG00480 1.0kb downstream 1.0kb downstream 1477 true ChrM: 129909-131385 Arabidopsis thaliana
ATMG00480 1.0kb downstream 1.0kb downstream 1000 false ChrM: 130386-131385 Arabidopsis thaliana
ATMG00480 2.0kb upstream 2.0kb upstream 2477 true ChrM: 127909-130385 Arabidopsis thaliana
ATMG00480 2.0kb upstream 2.0kb upstream 2000 false ChrM: 127909-129908 Arabidopsis thaliana
ATMG00480 2.0kb downstream 2.0kb downstream 2477 true ChrM: 129909-132385 Arabidopsis thaliana
ATMG00480 2.0kb downstream 2.0kb downstream 2000 false ChrM: 130386-132385 Arabidopsis thaliana
ATMG00480 5.0kb upstream 5.0kb upstream 5477 true ChrM: 124909-130385 Arabidopsis thaliana
ATMG00480 5.0kb upstream 5.0kb upstream 5000 false ChrM: 124909-129908 Arabidopsis thaliana
ATMG00480 5.0kb downstream 5.0kb downstream 5477 true ChrM: 129909-135385 Arabidopsis thaliana
ATMG00480 5.0kb downstream 5.0kb downstream 5000 false ChrM: 130386-135385 Arabidopsis thaliana
ATMG00480 10.0kb upstream 10.0kb upstream 10477 true ChrM: 119909-130385 Arabidopsis thaliana
ATMG00480 10.0kb upstream 10.0kb upstream 10000 false ChrM: 119909-129908 Arabidopsis thaliana
ATMG00480 10.0kb downstream 10.0kb downstream 10477 true ChrM: 129909-140385 Arabidopsis thaliana
ATMG00480 10.0kb downstream 10.0kb downstream 10000 false ChrM: 130386-140385 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028540 5273 Angiosperm View MSA
122378897 5261 Brassicaceae View MSA
123837474 5264 Brassicales-Malvales View MSA
124322315 5266 SBM View MSA
124169115 5268 Malvidae View MSA
124072094 5270 Rosid View MSA
123742856 5271 Pentapetalae View MSA
122795419 5272 Eudicot View MSA
121348300 5274 Embryophyte View MSA
123380809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176     Low  
cufflinks 0.86        
cufflinks 0.419        
cufflinks 0.421        
cufflinks 0.124     Low Low
cufflinks 1.388       High

0 Strain