Gene : ATCG01020 A. thaliana TAIR10
Defline:  (1 of 1) PTHR36083:SF1 - 50S RIBOSOMAL PROTEIN L32, CHLOROPLASTIC Genomic Order:  71
Name:  ? ATCG01020 Secondary Identifier:  ? PAC:19637963
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG01020 0.5kb upstream 0.5kb upstream 659 true ChrC: 112949-113607 Arabidopsis thaliana
ATCG01020 0.5kb upstream 0.5kb upstream 500 false ChrC: 112949-113448 Arabidopsis thaliana
ATCG01020 0.5kb downstream 0.5kb downstream 659 true ChrC: 113449-114107 Arabidopsis thaliana
ATCG01020 0.5kb downstream 0.5kb downstream 500 false ChrC: 113608-114107 Arabidopsis thaliana
ATCG01020 1.0kb upstream 1.0kb upstream 1159 true ChrC: 112449-113607 Arabidopsis thaliana
ATCG01020 1.0kb upstream 1.0kb upstream 1000 false ChrC: 112449-113448 Arabidopsis thaliana
ATCG01020 1.0kb downstream 1.0kb downstream 1159 true ChrC: 113449-114607 Arabidopsis thaliana
ATCG01020 1.0kb downstream 1.0kb downstream 1000 false ChrC: 113608-114607 Arabidopsis thaliana
ATCG01020 2.0kb upstream 2.0kb upstream 2159 true ChrC: 111449-113607 Arabidopsis thaliana
ATCG01020 2.0kb upstream 2.0kb upstream 2000 false ChrC: 111449-113448 Arabidopsis thaliana
ATCG01020 2.0kb downstream 2.0kb downstream 2159 true ChrC: 113449-115607 Arabidopsis thaliana
ATCG01020 2.0kb downstream 2.0kb downstream 2000 false ChrC: 113608-115607 Arabidopsis thaliana
ATCG01020 5.0kb upstream 5.0kb upstream 5159 true ChrC: 108449-113607 Arabidopsis thaliana
ATCG01020 5.0kb upstream 5.0kb upstream 5000 false ChrC: 108449-113448 Arabidopsis thaliana
ATCG01020 5.0kb downstream 5.0kb downstream 5159 true ChrC: 113449-118607 Arabidopsis thaliana
ATCG01020 5.0kb downstream 5.0kb downstream 5000 false ChrC: 113608-118607 Arabidopsis thaliana
ATCG01020 10.0kb upstream 10.0kb upstream 10159 true ChrC: 103449-113607 Arabidopsis thaliana
ATCG01020 10.0kb upstream 10.0kb upstream 10000 false ChrC: 103449-113448 Arabidopsis thaliana
ATCG01020 10.0kb downstream 10.0kb downstream 10159 true ChrC: 113449-123607 Arabidopsis thaliana
ATCG01020 10.0kb downstream 10.0kb downstream 10000 false ChrC: 113608-123607 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028919 5273 Angiosperm View MSA
122331523 5261 Brassicaceae Singleton cluster - no MSA
123837018 5264 Brassicales-Malvales View MSA
124322235 5266 SBM View MSA
124247986 5268 Malvidae View MSA
124070023 5270 Rosid View MSA
123742692 5271 Pentapetalae View MSA
122770355 5272 Eudicot View MSA
121298346 5274 Embryophyte View MSA
123336323 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 84.498     High  
cufflinks 4.565        
cufflinks 111.456     High High
cufflinks 5.652        
cufflinks 70.306     High  
cufflinks 3.949       Low

0 Strain