Gene : ATCG01050 A. thaliana TAIR10
Defline:  (1 of 1) K05575 - NAD(P)H-quinone oxidoreductase subunit 4 (ndhD) Genomic Order:  73
Name:  ? ATCG01050 Secondary Identifier:  ? PAC:19637969
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-4302 Arabidopsis thaliana pathologic  
Athaliana PWY-5083 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG01050 0.5kb upstream 0.5kb upstream 2021 true ChrC: 115665-117685 Arabidopsis thaliana
ATCG01050 0.5kb upstream 0.5kb upstream 500 false ChrC: 117186-117685 Arabidopsis thaliana
ATCG01050 0.5kb downstream 0.5kb downstream 2021 true ChrC: 115165-117185 Arabidopsis thaliana
ATCG01050 0.5kb downstream 0.5kb downstream 500 false ChrC: 115165-115664 Arabidopsis thaliana
ATCG01050 1.0kb upstream 1.0kb upstream 2521 true ChrC: 115665-118185 Arabidopsis thaliana
ATCG01050 1.0kb upstream 1.0kb upstream 1000 false ChrC: 117186-118185 Arabidopsis thaliana
ATCG01050 1.0kb downstream 1.0kb downstream 2521 true ChrC: 114665-117185 Arabidopsis thaliana
ATCG01050 1.0kb downstream 1.0kb downstream 1000 false ChrC: 114665-115664 Arabidopsis thaliana
ATCG01050 2.0kb upstream 2.0kb upstream 3521 true ChrC: 115665-119185 Arabidopsis thaliana
ATCG01050 2.0kb upstream 2.0kb upstream 2000 false ChrC: 117186-119185 Arabidopsis thaliana
ATCG01050 2.0kb downstream 2.0kb downstream 3521 true ChrC: 113665-117185 Arabidopsis thaliana
ATCG01050 2.0kb downstream 2.0kb downstream 2000 false ChrC: 113665-115664 Arabidopsis thaliana
ATCG01050 5.0kb upstream 5.0kb upstream 6521 true ChrC: 115665-122185 Arabidopsis thaliana
ATCG01050 5.0kb upstream 5.0kb upstream 5000 false ChrC: 117186-122185 Arabidopsis thaliana
ATCG01050 5.0kb downstream 5.0kb downstream 6521 true ChrC: 110665-117185 Arabidopsis thaliana
ATCG01050 5.0kb downstream 5.0kb downstream 5000 false ChrC: 110665-115664 Arabidopsis thaliana
ATCG01050 10.0kb upstream 10.0kb upstream 11521 true ChrC: 115665-127185 Arabidopsis thaliana
ATCG01050 10.0kb upstream 10.0kb upstream 10000 false ChrC: 117186-127185 Arabidopsis thaliana
ATCG01050 10.0kb downstream 10.0kb downstream 11521 true ChrC: 105665-117185 Arabidopsis thaliana
ATCG01050 10.0kb downstream 10.0kb downstream 10000 false ChrC: 105665-115664 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331526 5261 Brassicaceae Singleton cluster - no MSA
123772704 5264 Brassicales-Malvales Singleton cluster - no MSA
124271212 5266 SBM Singleton cluster - no MSA
124252475 5268 Malvidae View MSA
124037990 5270 Rosid View MSA
123751284 5271 Pentapetalae View MSA
122795690 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.044        
cufflinks 0.838        
cufflinks 12.217       High
cufflinks 0.652       Low
cufflinks 2.438        
cufflinks 2.807        

0 Strain