Gene : ATMG00030 A. thaliana TAIR10
Genomic Order:  2 Name:  ? ATMG00030
Secondary Identifier:  ? PAC:19643634
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00030 0.5kb upstream 0.5kb upstream 824 true ChrM: 11418-12241 Arabidopsis thaliana
ATMG00030 0.5kb upstream 0.5kb upstream 500 false ChrM: 11418-11917 Arabidopsis thaliana
ATMG00030 0.5kb downstream 0.5kb downstream 824 true ChrM: 11918-12741 Arabidopsis thaliana
ATMG00030 0.5kb downstream 0.5kb downstream 500 false ChrM: 12242-12741 Arabidopsis thaliana
ATMG00030 1.0kb upstream 1.0kb upstream 1324 true ChrM: 10918-12241 Arabidopsis thaliana
ATMG00030 1.0kb upstream 1.0kb upstream 1000 false ChrM: 10918-11917 Arabidopsis thaliana
ATMG00030 1.0kb downstream 1.0kb downstream 1324 true ChrM: 11918-13241 Arabidopsis thaliana
ATMG00030 1.0kb downstream 1.0kb downstream 1000 false ChrM: 12242-13241 Arabidopsis thaliana
ATMG00030 2.0kb upstream 2.0kb upstream 2324 true ChrM: 9918-12241 Arabidopsis thaliana
ATMG00030 2.0kb upstream 2.0kb upstream 2000 false ChrM: 9918-11917 Arabidopsis thaliana
ATMG00030 2.0kb downstream 2.0kb downstream 2324 true ChrM: 11918-14241 Arabidopsis thaliana
ATMG00030 2.0kb downstream 2.0kb downstream 2000 false ChrM: 12242-14241 Arabidopsis thaliana
ATMG00030 5.0kb upstream 5.0kb upstream 5324 true ChrM: 6918-12241 Arabidopsis thaliana
ATMG00030 5.0kb upstream 5.0kb upstream 5000 false ChrM: 6918-11917 Arabidopsis thaliana
ATMG00030 5.0kb downstream 5.0kb downstream 5324 true ChrM: 11918-17241 Arabidopsis thaliana
ATMG00030 5.0kb downstream 5.0kb downstream 5000 false ChrM: 12242-17241 Arabidopsis thaliana
ATMG00030 10.0kb upstream 10.0kb upstream 10324 true ChrM: 1918-12241 Arabidopsis thaliana
ATMG00030 10.0kb upstream 10.0kb upstream 10000 false ChrM: 1918-11917 Arabidopsis thaliana
ATMG00030 10.0kb downstream 10.0kb downstream 10324 true ChrM: 11918-22241 Arabidopsis thaliana
ATMG00030 10.0kb downstream 10.0kb downstream 10000 false ChrM: 12242-22241 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792064 5273 Angiosperm View MSA
122331558 5261 Brassicaceae Singleton cluster - no MSA
123772722 5264 Brassicales-Malvales Singleton cluster - no MSA
124271230 5266 SBM Singleton cluster - no MSA
124127232 5268 Malvidae Singleton cluster - no MSA
123856099 5270 Rosid Singleton cluster - no MSA
123745253 5271 Pentapetalae View MSA
122796206 5272 Eudicot View MSA
121063319 5274 Embryophyte View MSA
123103078 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.474        
cufflinks 1.981        
cufflinks 0.503        
cufflinks 0.198     Low Low
cufflinks 2.119       High

0 Strain