Gene : ATMG00040 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10031//PTHR10031:SF10 - ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  3
Name:  ? ATMG00040 Secondary Identifier:  ? PAC:19643613
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00040 0.5kb upstream 0.5kb upstream 1448 true ChrM: 16844-18291 Arabidopsis thaliana
ATMG00040 0.5kb upstream 0.5kb upstream 500 false ChrM: 17792-18291 Arabidopsis thaliana
ATMG00040 0.5kb downstream 0.5kb downstream 1448 true ChrM: 16344-17791 Arabidopsis thaliana
ATMG00040 0.5kb downstream 0.5kb downstream 500 false ChrM: 16344-16843 Arabidopsis thaliana
ATMG00040 1.0kb upstream 1.0kb upstream 1948 true ChrM: 16844-18791 Arabidopsis thaliana
ATMG00040 1.0kb upstream 1.0kb upstream 1000 false ChrM: 17792-18791 Arabidopsis thaliana
ATMG00040 1.0kb downstream 1.0kb downstream 1948 true ChrM: 15844-17791 Arabidopsis thaliana
ATMG00040 1.0kb downstream 1.0kb downstream 1000 false ChrM: 15844-16843 Arabidopsis thaliana
ATMG00040 2.0kb upstream 2.0kb upstream 2948 true ChrM: 16844-19791 Arabidopsis thaliana
ATMG00040 2.0kb upstream 2.0kb upstream 2000 false ChrM: 17792-19791 Arabidopsis thaliana
ATMG00040 2.0kb downstream 2.0kb downstream 2948 true ChrM: 14844-17791 Arabidopsis thaliana
ATMG00040 2.0kb downstream 2.0kb downstream 2000 false ChrM: 14844-16843 Arabidopsis thaliana
ATMG00040 5.0kb upstream 5.0kb upstream 5948 true ChrM: 16844-22791 Arabidopsis thaliana
ATMG00040 5.0kb upstream 5.0kb upstream 5000 false ChrM: 17792-22791 Arabidopsis thaliana
ATMG00040 5.0kb downstream 5.0kb downstream 5948 true ChrM: 11844-17791 Arabidopsis thaliana
ATMG00040 5.0kb downstream 5.0kb downstream 5000 false ChrM: 11844-16843 Arabidopsis thaliana
ATMG00040 10.0kb upstream 10.0kb upstream 10948 true ChrM: 16844-27791 Arabidopsis thaliana
ATMG00040 10.0kb upstream 10.0kb upstream 10000 false ChrM: 17792-27791 Arabidopsis thaliana
ATMG00040 10.0kb downstream 10.0kb downstream 10948 true ChrM: 6844-17791 Arabidopsis thaliana
ATMG00040 10.0kb downstream 10.0kb downstream 10000 false ChrM: 6844-16843 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495530 5273 Angiosperm View MSA
122331636 5261 Brassicaceae View MSA
123772793 5264 Brassicales-Malvales View MSA
124271300 5266 SBM View MSA
124127297 5268 Malvidae View MSA
123856155 5270 Rosid View MSA
123442099 5271 Pentapetalae View MSA
122477678 5272 Eudicot View MSA
120768895 5274 Embryophyte View MSA
122811277 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.241     Low  
cufflinks 0.239     Low  
cufflinks 0.298        
cufflinks 0.254     Low  
cufflinks 0.166     Low Low
cufflinks 0.405       High

0 Strain