Gene : AT3G08590 A. thaliana TAIR10
Defline:  (1 of 2) 5.4.2.11//5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase // Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  807
Name:  ? AT3G08590 Secondary Identifier:  ? PAC:19662965
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-1042 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08590 0.5kb upstream 0.5kb upstream 3448 true Chr3: 2608471-2611918 Arabidopsis thaliana
AT3G08590 0.5kb upstream 0.5kb upstream 500 false Chr3: 2611419-2611918 Arabidopsis thaliana
AT3G08590 0.5kb downstream 0.5kb downstream 3448 true Chr3: 2607971-2611418 Arabidopsis thaliana
AT3G08590 0.5kb downstream 0.5kb downstream 500 false Chr3: 2607971-2608470 Arabidopsis thaliana
AT3G08590 1.0kb upstream 1.0kb upstream 3948 true Chr3: 2608471-2612418 Arabidopsis thaliana
AT3G08590 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2611419-2612418 Arabidopsis thaliana
AT3G08590 1.0kb downstream 1.0kb downstream 3948 true Chr3: 2607471-2611418 Arabidopsis thaliana
AT3G08590 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2607471-2608470 Arabidopsis thaliana
AT3G08590 2.0kb upstream 2.0kb upstream 4948 true Chr3: 2608471-2613418 Arabidopsis thaliana
AT3G08590 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2611419-2613418 Arabidopsis thaliana
AT3G08590 2.0kb downstream 2.0kb downstream 4948 true Chr3: 2606471-2611418 Arabidopsis thaliana
AT3G08590 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2606471-2608470 Arabidopsis thaliana
AT3G08590 5.0kb upstream 5.0kb upstream 7948 true Chr3: 2608471-2616418 Arabidopsis thaliana
AT3G08590 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2611419-2616418 Arabidopsis thaliana
AT3G08590 5.0kb downstream 5.0kb downstream 7948 true Chr3: 2603471-2611418 Arabidopsis thaliana
AT3G08590 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2603471-2608470 Arabidopsis thaliana
AT3G08590 10.0kb upstream 10.0kb upstream 12948 true Chr3: 2608471-2621418 Arabidopsis thaliana
AT3G08590 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2611419-2621418 Arabidopsis thaliana
AT3G08590 10.0kb downstream 10.0kb downstream 12948 true Chr3: 2598471-2611418 Arabidopsis thaliana
AT3G08590 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2598471-2608470 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377770 5261 Brassicaceae View MSA
123836742 5264 Brassicales-Malvales View MSA
124338470 5266 SBM View MSA
124253094 5268 Malvidae View MSA
124066615 5270 Rosid View MSA
123743757 5271 Pentapetalae View MSA
122792316 5272 Eudicot View MSA
122046842 5273 Angiosperm View MSA
121351073 5274 Embryophyte View MSA
123427099 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.972        
cufflinks 17.964        
cufflinks 25.612        
cufflinks 28.154        
cufflinks 31.472     High High
cufflinks 13.459       Low

0 Strain