Gene : PLC2 A. thaliana TAIR10
Primary Identifier:  ? AT3G08510 Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD)
Genomic Order:  800 Name:  ? AT3G08510
Secondary Identifier:  ? PAC:19658409
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPASYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6367 Arabidopsis thaliana pathologic  
Athaliana PWY-7039 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08510 0.5kb upstream 0.5kb upstream 3990 true Chr3: 2582362-2586351 Arabidopsis thaliana
AT3G08510 0.5kb upstream 0.5kb upstream 500 false Chr3: 2585852-2586351 Arabidopsis thaliana
AT3G08510 0.5kb downstream 0.5kb downstream 3990 true Chr3: 2581862-2585851 Arabidopsis thaliana
AT3G08510 0.5kb downstream 0.5kb downstream 500 false Chr3: 2581862-2582361 Arabidopsis thaliana
AT3G08510 1.0kb upstream 1.0kb upstream 4490 true Chr3: 2582362-2586851 Arabidopsis thaliana
AT3G08510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2585852-2586851 Arabidopsis thaliana
AT3G08510 1.0kb downstream 1.0kb downstream 4490 true Chr3: 2581362-2585851 Arabidopsis thaliana
AT3G08510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2581362-2582361 Arabidopsis thaliana
AT3G08510 2.0kb upstream 2.0kb upstream 5490 true Chr3: 2582362-2587851 Arabidopsis thaliana
AT3G08510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2585852-2587851 Arabidopsis thaliana
AT3G08510 2.0kb downstream 2.0kb downstream 5490 true Chr3: 2580362-2585851 Arabidopsis thaliana
AT3G08510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2580362-2582361 Arabidopsis thaliana
AT3G08510 5.0kb upstream 5.0kb upstream 8490 true Chr3: 2582362-2590851 Arabidopsis thaliana
AT3G08510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2585852-2590851 Arabidopsis thaliana
AT3G08510 5.0kb downstream 5.0kb downstream 8490 true Chr3: 2577362-2585851 Arabidopsis thaliana
AT3G08510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2577362-2582361 Arabidopsis thaliana
AT3G08510 10.0kb upstream 10.0kb upstream 13490 true Chr3: 2582362-2595851 Arabidopsis thaliana
AT3G08510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2585852-2595851 Arabidopsis thaliana
AT3G08510 10.0kb downstream 10.0kb downstream 13490 true Chr3: 2572362-2585851 Arabidopsis thaliana
AT3G08510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2572362-2582361 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376253 5261 Brassicaceae View MSA
123827505 5264 Brassicales-Malvales View MSA
124337245 5266 SBM View MSA
124244278 5268 Malvidae View MSA
124061623 5270 Rosid View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.793        
cufflinks 20.508        
cufflinks 34.322     High High
cufflinks 19.469        
cufflinks 32.029     High High
cufflinks 18.624       Low

0 Strain