Gene : AT3G07660 A. thaliana TAIR10
Defline:  (1 of 3) PTHR12758//PTHR12758:SF13 - APOPTOSIS INHIBITOR 5-RELATED // GBF-INTERACTING PROTEIN 1 Genomic Order:  758
Name:  ? AT3G07660 Secondary Identifier:  ? PAC:19660783
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07660 0.5kb upstream 0.5kb upstream 6284 true Chr3: 2444778-2451061 Arabidopsis thaliana
AT3G07660 0.5kb upstream 0.5kb upstream 500 false Chr3: 2450562-2451061 Arabidopsis thaliana
AT3G07660 0.5kb downstream 0.5kb downstream 6284 true Chr3: 2444278-2450561 Arabidopsis thaliana
AT3G07660 0.5kb downstream 0.5kb downstream 500 false Chr3: 2444278-2444777 Arabidopsis thaliana
AT3G07660 1.0kb upstream 1.0kb upstream 6784 true Chr3: 2444778-2451561 Arabidopsis thaliana
AT3G07660 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2450562-2451561 Arabidopsis thaliana
AT3G07660 1.0kb downstream 1.0kb downstream 6784 true Chr3: 2443778-2450561 Arabidopsis thaliana
AT3G07660 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2443778-2444777 Arabidopsis thaliana
AT3G07660 2.0kb upstream 2.0kb upstream 7784 true Chr3: 2444778-2452561 Arabidopsis thaliana
AT3G07660 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2450562-2452561 Arabidopsis thaliana
AT3G07660 2.0kb downstream 2.0kb downstream 7784 true Chr3: 2442778-2450561 Arabidopsis thaliana
AT3G07660 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2442778-2444777 Arabidopsis thaliana
AT3G07660 5.0kb upstream 5.0kb upstream 10784 true Chr3: 2444778-2455561 Arabidopsis thaliana
AT3G07660 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2450562-2455561 Arabidopsis thaliana
AT3G07660 5.0kb downstream 5.0kb downstream 10784 true Chr3: 2439778-2450561 Arabidopsis thaliana
AT3G07660 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2439778-2444777 Arabidopsis thaliana
AT3G07660 10.0kb upstream 10.0kb upstream 15784 true Chr3: 2444778-2460561 Arabidopsis thaliana
AT3G07660 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2450562-2460561 Arabidopsis thaliana
AT3G07660 10.0kb downstream 10.0kb downstream 15784 true Chr3: 2434778-2450561 Arabidopsis thaliana
AT3G07660 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2434778-2444777 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379037 5261 Brassicaceae View MSA
123828327 5264 Brassicales-Malvales View MSA
124340247 5266 SBM View MSA
124237155 5268 Malvidae View MSA
124068947 5270 Rosid View MSA
123748451 5271 Pentapetalae View MSA
122772624 5272 Eudicot View MSA
122044535 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.844        
cufflinks 15.353        
cufflinks 8.56       Low
cufflinks 16.046        
cufflinks 9.145        
cufflinks 15.507        

0 Strain