Gene : AT3G07680 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  760
Name:  ? AT3G07680 Secondary Identifier:  ? PAC:19658776
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07680 0.5kb upstream 0.5kb upstream 2090 true Chr3: 2454790-2456879 Arabidopsis thaliana
AT3G07680 0.5kb upstream 0.5kb upstream 500 false Chr3: 2454790-2455289 Arabidopsis thaliana
AT3G07680 0.5kb downstream 0.5kb downstream 2090 true Chr3: 2455290-2457379 Arabidopsis thaliana
AT3G07680 0.5kb downstream 0.5kb downstream 500 false Chr3: 2456880-2457379 Arabidopsis thaliana
AT3G07680 1.0kb upstream 1.0kb upstream 2590 true Chr3: 2454290-2456879 Arabidopsis thaliana
AT3G07680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2454290-2455289 Arabidopsis thaliana
AT3G07680 1.0kb downstream 1.0kb downstream 2590 true Chr3: 2455290-2457879 Arabidopsis thaliana
AT3G07680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2456880-2457879 Arabidopsis thaliana
AT3G07680 2.0kb upstream 2.0kb upstream 3590 true Chr3: 2453290-2456879 Arabidopsis thaliana
AT3G07680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2453290-2455289 Arabidopsis thaliana
AT3G07680 2.0kb downstream 2.0kb downstream 3590 true Chr3: 2455290-2458879 Arabidopsis thaliana
AT3G07680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2456880-2458879 Arabidopsis thaliana
AT3G07680 5.0kb upstream 5.0kb upstream 6590 true Chr3: 2450290-2456879 Arabidopsis thaliana
AT3G07680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2450290-2455289 Arabidopsis thaliana
AT3G07680 5.0kb downstream 5.0kb downstream 6590 true Chr3: 2455290-2461879 Arabidopsis thaliana
AT3G07680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2456880-2461879 Arabidopsis thaliana
AT3G07680 10.0kb upstream 10.0kb upstream 11590 true Chr3: 2445290-2456879 Arabidopsis thaliana
AT3G07680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2445290-2455289 Arabidopsis thaliana
AT3G07680 10.0kb downstream 10.0kb downstream 11590 true Chr3: 2455290-2466879 Arabidopsis thaliana
AT3G07680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2456880-2466879 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362679 5261 Brassicaceae View MSA
123835541 5264 Brassicales-Malvales View MSA
124350122 5266 SBM View MSA
124242385 5268 Malvidae View MSA
124072381 5270 Rosid View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.61     High High
cufflinks 41.727     High  
cufflinks 31.738     High Low
cufflinks 44.413     High  
cufflinks 35.4     High  
cufflinks 46.801     High  

0 Strain