Gene : KOB1 A. thaliana TAIR10
Primary Identifier:  ? AT3G08550 Defline:  (1 of 1) PTHR10774:SF61 - ELONGATION DEFECTIVE 1
Genomic Order:  803 Name:  ? AT3G08550
Secondary Identifier:  ? PAC:19660757
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08550 0.5kb upstream 0.5kb upstream 3914 true Chr3: 2595906-2599819 Arabidopsis thaliana
AT3G08550 0.5kb upstream 0.5kb upstream 500 false Chr3: 2595906-2596405 Arabidopsis thaliana
AT3G08550 0.5kb downstream 0.5kb downstream 3914 true Chr3: 2596406-2600319 Arabidopsis thaliana
AT3G08550 0.5kb downstream 0.5kb downstream 500 false Chr3: 2599820-2600319 Arabidopsis thaliana
AT3G08550 1.0kb upstream 1.0kb upstream 4414 true Chr3: 2595406-2599819 Arabidopsis thaliana
AT3G08550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2595406-2596405 Arabidopsis thaliana
AT3G08550 1.0kb downstream 1.0kb downstream 4414 true Chr3: 2596406-2600819 Arabidopsis thaliana
AT3G08550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2599820-2600819 Arabidopsis thaliana
AT3G08550 2.0kb upstream 2.0kb upstream 5414 true Chr3: 2594406-2599819 Arabidopsis thaliana
AT3G08550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2594406-2596405 Arabidopsis thaliana
AT3G08550 2.0kb downstream 2.0kb downstream 5414 true Chr3: 2596406-2601819 Arabidopsis thaliana
AT3G08550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2599820-2601819 Arabidopsis thaliana
AT3G08550 5.0kb upstream 5.0kb upstream 8414 true Chr3: 2591406-2599819 Arabidopsis thaliana
AT3G08550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2591406-2596405 Arabidopsis thaliana
AT3G08550 5.0kb downstream 5.0kb downstream 8414 true Chr3: 2596406-2604819 Arabidopsis thaliana
AT3G08550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2599820-2604819 Arabidopsis thaliana
AT3G08550 10.0kb upstream 10.0kb upstream 13414 true Chr3: 2586406-2599819 Arabidopsis thaliana
AT3G08550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2586406-2596405 Arabidopsis thaliana
AT3G08550 10.0kb downstream 10.0kb downstream 13414 true Chr3: 2596406-2609819 Arabidopsis thaliana
AT3G08550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2599820-2609819 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371730 5261 Brassicaceae View MSA
123827448 5264 Brassicales-Malvales View MSA
124345599 5266 SBM View MSA
124243258 5268 Malvidae View MSA
124074098 5270 Rosid View MSA
123747804 5271 Pentapetalae View MSA
122791335 5272 Eudicot View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.447        
cufflinks 11.707        
cufflinks 9.917       Low
cufflinks 13.729        
cufflinks 10.243        
cufflinks 14.903       High

0 Strain