Gene : AT3G07530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11203:SF2 - INTEGRATOR COMPLEX SUBUNIT 9 Genomic Order:  743
Name:  ? AT3G07530 Secondary Identifier:  ? PAC:19661989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07530 0.5kb upstream 0.5kb upstream 3988 true Chr3: 2400293-2404280 Arabidopsis thaliana
AT3G07530 0.5kb upstream 0.5kb upstream 500 false Chr3: 2400293-2400792 Arabidopsis thaliana
AT3G07530 0.5kb downstream 0.5kb downstream 3988 true Chr3: 2400793-2404780 Arabidopsis thaliana
AT3G07530 0.5kb downstream 0.5kb downstream 500 false Chr3: 2404281-2404780 Arabidopsis thaliana
AT3G07530 1.0kb upstream 1.0kb upstream 4488 true Chr3: 2399793-2404280 Arabidopsis thaliana
AT3G07530 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2399793-2400792 Arabidopsis thaliana
AT3G07530 1.0kb downstream 1.0kb downstream 4488 true Chr3: 2400793-2405280 Arabidopsis thaliana
AT3G07530 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2404281-2405280 Arabidopsis thaliana
AT3G07530 2.0kb upstream 2.0kb upstream 5488 true Chr3: 2398793-2404280 Arabidopsis thaliana
AT3G07530 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2398793-2400792 Arabidopsis thaliana
AT3G07530 2.0kb downstream 2.0kb downstream 5488 true Chr3: 2400793-2406280 Arabidopsis thaliana
AT3G07530 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2404281-2406280 Arabidopsis thaliana
AT3G07530 5.0kb upstream 5.0kb upstream 8488 true Chr3: 2395793-2404280 Arabidopsis thaliana
AT3G07530 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2395793-2400792 Arabidopsis thaliana
AT3G07530 5.0kb downstream 5.0kb downstream 8488 true Chr3: 2400793-2409280 Arabidopsis thaliana
AT3G07530 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2404281-2409280 Arabidopsis thaliana
AT3G07530 10.0kb upstream 10.0kb upstream 13488 true Chr3: 2390793-2404280 Arabidopsis thaliana
AT3G07530 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2390793-2400792 Arabidopsis thaliana
AT3G07530 10.0kb downstream 10.0kb downstream 13488 true Chr3: 2400793-2414280 Arabidopsis thaliana
AT3G07530 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2404281-2414280 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367271 5261 Brassicaceae View MSA
123834505 5264 Brassicales-Malvales View MSA
124346307 5266 SBM View MSA
124242862 5268 Malvidae View MSA
124068751 5270 Rosid View MSA
123737270 5271 Pentapetalae View MSA
122787689 5272 Eudicot View MSA
122041612 5273 Angiosperm View MSA
121343816 5274 Embryophyte View MSA
123379922 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.564        
cufflinks 2.327       High
cufflinks 1.387       Low
cufflinks 2.135        
cufflinks 1.574        
cufflinks 1.829        

0 Strain