Gene : PUB9 A. thaliana TAIR10
Primary Identifier:  ? AT3G07360 Defline:  (1 of 1) PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9
Genomic Order:  723 Name:  ? AT3G07360
Secondary Identifier:  ? PAC:19661679
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07360 0.5kb upstream 0.5kb upstream 2636 true Chr3: 2354219-2356854 Arabidopsis thaliana
AT3G07360 0.5kb upstream 0.5kb upstream 500 false Chr3: 2354219-2354718 Arabidopsis thaliana
AT3G07360 0.5kb downstream 0.5kb downstream 2636 true Chr3: 2354719-2357354 Arabidopsis thaliana
AT3G07360 0.5kb downstream 0.5kb downstream 500 false Chr3: 2356855-2357354 Arabidopsis thaliana
AT3G07360 1.0kb upstream 1.0kb upstream 3136 true Chr3: 2353719-2356854 Arabidopsis thaliana
AT3G07360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2353719-2354718 Arabidopsis thaliana
AT3G07360 1.0kb downstream 1.0kb downstream 3136 true Chr3: 2354719-2357854 Arabidopsis thaliana
AT3G07360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2356855-2357854 Arabidopsis thaliana
AT3G07360 2.0kb upstream 2.0kb upstream 4136 true Chr3: 2352719-2356854 Arabidopsis thaliana
AT3G07360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2352719-2354718 Arabidopsis thaliana
AT3G07360 2.0kb downstream 2.0kb downstream 4136 true Chr3: 2354719-2358854 Arabidopsis thaliana
AT3G07360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2356855-2358854 Arabidopsis thaliana
AT3G07360 5.0kb upstream 5.0kb upstream 7136 true Chr3: 2349719-2356854 Arabidopsis thaliana
AT3G07360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2349719-2354718 Arabidopsis thaliana
AT3G07360 5.0kb downstream 5.0kb downstream 7136 true Chr3: 2354719-2361854 Arabidopsis thaliana
AT3G07360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2356855-2361854 Arabidopsis thaliana
AT3G07360 10.0kb upstream 10.0kb upstream 12136 true Chr3: 2344719-2356854 Arabidopsis thaliana
AT3G07360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2344719-2354718 Arabidopsis thaliana
AT3G07360 10.0kb downstream 10.0kb downstream 12136 true Chr3: 2354719-2366854 Arabidopsis thaliana
AT3G07360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2356855-2366854 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122369744 5261 Brassicaceae View MSA
123835906 5264 Brassicales-Malvales View MSA
124342751 5266 SBM View MSA
124251189 5268 Malvidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.815        
cufflinks 33.164     High  
cufflinks 16.916       Low
cufflinks 30.422     High  
cufflinks 17.92        
cufflinks 40.626     High High

0 Strain