Gene : AT3G07180 A. thaliana TAIR10
Defline:  (1 of 1) K05291 - phosphatidylinositol glycan, class S (PIGS) Genomic Order:  705
Name:  ? AT3G07180 Secondary Identifier:  ? PAC:19661399
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07180 0.5kb upstream 0.5kb upstream 3817 true Chr3: 2282233-2286049 Arabidopsis thaliana
AT3G07180 0.5kb upstream 0.5kb upstream 500 false Chr3: 2285550-2286049 Arabidopsis thaliana
AT3G07180 0.5kb downstream 0.5kb downstream 3817 true Chr3: 2281733-2285549 Arabidopsis thaliana
AT3G07180 0.5kb downstream 0.5kb downstream 500 false Chr3: 2281733-2282232 Arabidopsis thaliana
AT3G07180 1.0kb upstream 1.0kb upstream 4317 true Chr3: 2282233-2286549 Arabidopsis thaliana
AT3G07180 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2285550-2286549 Arabidopsis thaliana
AT3G07180 1.0kb downstream 1.0kb downstream 4317 true Chr3: 2281233-2285549 Arabidopsis thaliana
AT3G07180 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2281233-2282232 Arabidopsis thaliana
AT3G07180 2.0kb upstream 2.0kb upstream 5317 true Chr3: 2282233-2287549 Arabidopsis thaliana
AT3G07180 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2285550-2287549 Arabidopsis thaliana
AT3G07180 2.0kb downstream 2.0kb downstream 5317 true Chr3: 2280233-2285549 Arabidopsis thaliana
AT3G07180 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2280233-2282232 Arabidopsis thaliana
AT3G07180 5.0kb upstream 5.0kb upstream 8317 true Chr3: 2282233-2290549 Arabidopsis thaliana
AT3G07180 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2285550-2290549 Arabidopsis thaliana
AT3G07180 5.0kb downstream 5.0kb downstream 8317 true Chr3: 2277233-2285549 Arabidopsis thaliana
AT3G07180 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2277233-2282232 Arabidopsis thaliana
AT3G07180 10.0kb upstream 10.0kb upstream 13317 true Chr3: 2282233-2295549 Arabidopsis thaliana
AT3G07180 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2285550-2295549 Arabidopsis thaliana
AT3G07180 10.0kb downstream 10.0kb downstream 13317 true Chr3: 2272233-2285549 Arabidopsis thaliana
AT3G07180 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2272233-2282232 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374729 5261 Brassicaceae View MSA
123834954 5264 Brassicales-Malvales View MSA
124341771 5266 SBM View MSA
124241434 5268 Malvidae View MSA
124066381 5270 Rosid View MSA
123740314 5271 Pentapetalae View MSA
122787457 5272 Eudicot View MSA
122046562 5273 Angiosperm View MSA
121348153 5274 Embryophyte View MSA
123426160 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.231        
cufflinks 6.89        
cufflinks 4.817       Low
cufflinks 7.097       High
cufflinks 5.189        
cufflinks 6.638        

0 Strain