Gene : LCR44 A. thaliana TAIR10
Primary Identifier:  ? AT3G06985 Defline:  low-molecular-weight cysteine-rich 44
Genomic Order:  684 Name:  ? AT3G06985
Secondary Identifier:  ? PAC:19662908
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06985 0.5kb upstream 0.5kb upstream 815 true Chr3: 2204892-2205706 Arabidopsis thaliana
AT3G06985 0.5kb upstream 0.5kb upstream 500 false Chr3: 2204892-2205391 Arabidopsis thaliana
AT3G06985 0.5kb downstream 0.5kb downstream 815 true Chr3: 2205392-2206206 Arabidopsis thaliana
AT3G06985 0.5kb downstream 0.5kb downstream 500 false Chr3: 2205707-2206206 Arabidopsis thaliana
AT3G06985 1.0kb upstream 1.0kb upstream 1315 true Chr3: 2204392-2205706 Arabidopsis thaliana
AT3G06985 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2204392-2205391 Arabidopsis thaliana
AT3G06985 1.0kb downstream 1.0kb downstream 1315 true Chr3: 2205392-2206706 Arabidopsis thaliana
AT3G06985 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2205707-2206706 Arabidopsis thaliana
AT3G06985 2.0kb upstream 2.0kb upstream 2315 true Chr3: 2203392-2205706 Arabidopsis thaliana
AT3G06985 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2203392-2205391 Arabidopsis thaliana
AT3G06985 2.0kb downstream 2.0kb downstream 2315 true Chr3: 2205392-2207706 Arabidopsis thaliana
AT3G06985 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2205707-2207706 Arabidopsis thaliana
AT3G06985 5.0kb upstream 5.0kb upstream 5315 true Chr3: 2200392-2205706 Arabidopsis thaliana
AT3G06985 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2200392-2205391 Arabidopsis thaliana
AT3G06985 5.0kb downstream 5.0kb downstream 5315 true Chr3: 2205392-2210706 Arabidopsis thaliana
AT3G06985 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2205707-2210706 Arabidopsis thaliana
AT3G06985 10.0kb upstream 10.0kb upstream 10315 true Chr3: 2195392-2205706 Arabidopsis thaliana
AT3G06985 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2195392-2205391 Arabidopsis thaliana
AT3G06985 10.0kb downstream 10.0kb downstream 10315 true Chr3: 2205392-2215706 Arabidopsis thaliana
AT3G06985 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2205707-2215706 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027926 5273 Angiosperm View MSA
122376922 5261 Brassicaceae View MSA
123837308 5264 Brassicales-Malvales View MSA
124322282 5266 SBM View MSA
124252856 5268 Malvidae View MSA
124050614 5270 Rosid View MSA
123744076 5271 Pentapetalae View MSA
122770894 5272 Eudicot View MSA
121297498 5274 Embryophyte View MSA
123335549 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195     Low  
cufflinks 0.144     Low  
cufflinks 0.05     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153     Low  

0 Strain