Gene : IMPA-1 A. thaliana TAIR10
Primary Identifier:  ? AT3G06720 Defline:  (1 of 4) PTHR23316//PTHR23316:SF22 - IMPORTIN ALPHA // ARMADILLO/BETA-CATENIN-LIKE REPEATS-CONTAINING PROTEIN-RELATED
Genomic Order:  657 Name:  ? AT3G06720
Secondary Identifier:  ? PAC:19663211
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06720 0.5kb upstream 0.5kb upstream 4308 true Chr3: 2119824-2124131 Arabidopsis thaliana
AT3G06720 0.5kb upstream 0.5kb upstream 500 false Chr3: 2119824-2120323 Arabidopsis thaliana
AT3G06720 0.5kb downstream 0.5kb downstream 4308 true Chr3: 2120324-2124631 Arabidopsis thaliana
AT3G06720 0.5kb downstream 0.5kb downstream 500 false Chr3: 2124132-2124631 Arabidopsis thaliana
AT3G06720 1.0kb upstream 1.0kb upstream 4808 true Chr3: 2119324-2124131 Arabidopsis thaliana
AT3G06720 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2119324-2120323 Arabidopsis thaliana
AT3G06720 1.0kb downstream 1.0kb downstream 4808 true Chr3: 2120324-2125131 Arabidopsis thaliana
AT3G06720 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2124132-2125131 Arabidopsis thaliana
AT3G06720 2.0kb upstream 2.0kb upstream 5808 true Chr3: 2118324-2124131 Arabidopsis thaliana
AT3G06720 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2118324-2120323 Arabidopsis thaliana
AT3G06720 2.0kb downstream 2.0kb downstream 5808 true Chr3: 2120324-2126131 Arabidopsis thaliana
AT3G06720 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2124132-2126131 Arabidopsis thaliana
AT3G06720 5.0kb upstream 5.0kb upstream 8808 true Chr3: 2115324-2124131 Arabidopsis thaliana
AT3G06720 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2115324-2120323 Arabidopsis thaliana
AT3G06720 5.0kb downstream 5.0kb downstream 8808 true Chr3: 2120324-2129131 Arabidopsis thaliana
AT3G06720 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2124132-2129131 Arabidopsis thaliana
AT3G06720 10.0kb upstream 10.0kb upstream 13808 true Chr3: 2110324-2124131 Arabidopsis thaliana
AT3G06720 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2110324-2120323 Arabidopsis thaliana
AT3G06720 10.0kb downstream 10.0kb downstream 13808 true Chr3: 2120324-2134131 Arabidopsis thaliana
AT3G06720 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2124132-2134131 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041121 5273 Angiosperm View MSA
122377866 5261 Brassicaceae View MSA
123839901 5264 Brassicales-Malvales View MSA
124322663 5266 SBM View MSA
124249289 5268 Malvidae View MSA
124069677 5270 Rosid View MSA
123750756 5271 Pentapetalae View MSA
122792283 5272 Eudicot View MSA
121348544 5274 Embryophyte View MSA
123424377 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.79        
cufflinks 21.138        
cufflinks 10.515        
cufflinks 19.329        
cufflinks 9.828       Low
cufflinks 24.766       High

0 Strain