Gene : AT3G06470 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  625
Name:  ? AT3G06470 Secondary Identifier:  ? PAC:19663387
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5080 Arabidopsis thaliana pathologic  
Athaliana PWY-6433 Arabidopsis thaliana pathologic  
Athaliana PWY-6598 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-7601 Arabidopsis thaliana pathologic  
Athaliana PWY-7619 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06470 0.5kb upstream 0.5kb upstream 1592 true Chr3: 1983668-1985259 Arabidopsis thaliana
AT3G06470 0.5kb upstream 0.5kb upstream 500 false Chr3: 1983668-1984167 Arabidopsis thaliana
AT3G06470 0.5kb downstream 0.5kb downstream 1592 true Chr3: 1984168-1985759 Arabidopsis thaliana
AT3G06470 0.5kb downstream 0.5kb downstream 500 false Chr3: 1985260-1985759 Arabidopsis thaliana
AT3G06470 1.0kb upstream 1.0kb upstream 2092 true Chr3: 1983168-1985259 Arabidopsis thaliana
AT3G06470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1983168-1984167 Arabidopsis thaliana
AT3G06470 1.0kb downstream 1.0kb downstream 2092 true Chr3: 1984168-1986259 Arabidopsis thaliana
AT3G06470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1985260-1986259 Arabidopsis thaliana
AT3G06470 2.0kb upstream 2.0kb upstream 3092 true Chr3: 1982168-1985259 Arabidopsis thaliana
AT3G06470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1982168-1984167 Arabidopsis thaliana
AT3G06470 2.0kb downstream 2.0kb downstream 3092 true Chr3: 1984168-1987259 Arabidopsis thaliana
AT3G06470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1985260-1987259 Arabidopsis thaliana
AT3G06470 5.0kb upstream 5.0kb upstream 6092 true Chr3: 1979168-1985259 Arabidopsis thaliana
AT3G06470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1979168-1984167 Arabidopsis thaliana
AT3G06470 5.0kb downstream 5.0kb downstream 6092 true Chr3: 1984168-1990259 Arabidopsis thaliana
AT3G06470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1985260-1990259 Arabidopsis thaliana
AT3G06470 10.0kb upstream 10.0kb upstream 11092 true Chr3: 1974168-1985259 Arabidopsis thaliana
AT3G06470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1974168-1984167 Arabidopsis thaliana
AT3G06470 10.0kb downstream 10.0kb downstream 11092 true Chr3: 1984168-1995259 Arabidopsis thaliana
AT3G06470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1985260-1995259 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364090 5261 Brassicaceae View MSA
123833809 5264 Brassicales-Malvales View MSA
124321899 5266 SBM View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.093        
cufflinks 8.508        
cufflinks 15.934        
cufflinks 7.841        
cufflinks 19.101       High
cufflinks 5.138       Low

0 Strain