Gene : AT3G06040 A. thaliana TAIR10
Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL) Genomic Order:  578
Name:  ? AT3G06040 Secondary Identifier:  ? PAC:19658537
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06040 0.5kb upstream 0.5kb upstream 1788 true Chr3: 1824376-1826163 Arabidopsis thaliana
AT3G06040 0.5kb upstream 0.5kb upstream 500 false Chr3: 1825664-1826163 Arabidopsis thaliana
AT3G06040 0.5kb downstream 0.5kb downstream 1788 true Chr3: 1823876-1825663 Arabidopsis thaliana
AT3G06040 0.5kb downstream 0.5kb downstream 500 false Chr3: 1823876-1824375 Arabidopsis thaliana
AT3G06040 1.0kb upstream 1.0kb upstream 2288 true Chr3: 1824376-1826663 Arabidopsis thaliana
AT3G06040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1825664-1826663 Arabidopsis thaliana
AT3G06040 1.0kb downstream 1.0kb downstream 2288 true Chr3: 1823376-1825663 Arabidopsis thaliana
AT3G06040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1823376-1824375 Arabidopsis thaliana
AT3G06040 2.0kb upstream 2.0kb upstream 3288 true Chr3: 1824376-1827663 Arabidopsis thaliana
AT3G06040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1825664-1827663 Arabidopsis thaliana
AT3G06040 2.0kb downstream 2.0kb downstream 3288 true Chr3: 1822376-1825663 Arabidopsis thaliana
AT3G06040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1822376-1824375 Arabidopsis thaliana
AT3G06040 5.0kb upstream 5.0kb upstream 6288 true Chr3: 1824376-1830663 Arabidopsis thaliana
AT3G06040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1825664-1830663 Arabidopsis thaliana
AT3G06040 5.0kb downstream 5.0kb downstream 6288 true Chr3: 1819376-1825663 Arabidopsis thaliana
AT3G06040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1819376-1824375 Arabidopsis thaliana
AT3G06040 10.0kb upstream 10.0kb upstream 11288 true Chr3: 1824376-1835663 Arabidopsis thaliana
AT3G06040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1825664-1835663 Arabidopsis thaliana
AT3G06040 10.0kb downstream 10.0kb downstream 11288 true Chr3: 1814376-1825663 Arabidopsis thaliana
AT3G06040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1814376-1824375 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368304 5261 Brassicaceae View MSA
123833397 5264 Brassicales-Malvales View MSA
124344859 5266 SBM View MSA
124244566 5268 Malvidae View MSA
124065088 5270 Rosid View MSA
123737507 5271 Pentapetalae View MSA
122792305 5272 Eudicot View MSA
122044886 5273 Angiosperm View MSA
121348936 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.436        
cufflinks 13.495        
cufflinks 11.745        
cufflinks 13.856        
cufflinks 9.538       Low
cufflinks 13.89        

0 Strain