Gene : AT3G05700 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31875//PTHR31875:SF0 - FAMILY NOT NAMED // PROTEIN DEHYDRATION-INDUCED 19-RELATED Genomic Order:  534
Name:  ? AT3G05700 Secondary Identifier:  ? PAC:19662312
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05700 0.5kb upstream 0.5kb upstream 2985 true Chr3: 1682088-1685072 Arabidopsis thaliana
AT3G05700 0.5kb upstream 0.5kb upstream 500 false Chr3: 1684573-1685072 Arabidopsis thaliana
AT3G05700 0.5kb downstream 0.5kb downstream 2985 true Chr3: 1681588-1684572 Arabidopsis thaliana
AT3G05700 0.5kb downstream 0.5kb downstream 500 false Chr3: 1681588-1682087 Arabidopsis thaliana
AT3G05700 1.0kb upstream 1.0kb upstream 3485 true Chr3: 1682088-1685572 Arabidopsis thaliana
AT3G05700 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1684573-1685572 Arabidopsis thaliana
AT3G05700 1.0kb downstream 1.0kb downstream 3485 true Chr3: 1681088-1684572 Arabidopsis thaliana
AT3G05700 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1681088-1682087 Arabidopsis thaliana
AT3G05700 2.0kb upstream 2.0kb upstream 4485 true Chr3: 1682088-1686572 Arabidopsis thaliana
AT3G05700 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1684573-1686572 Arabidopsis thaliana
AT3G05700 2.0kb downstream 2.0kb downstream 4485 true Chr3: 1680088-1684572 Arabidopsis thaliana
AT3G05700 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1680088-1682087 Arabidopsis thaliana
AT3G05700 5.0kb upstream 5.0kb upstream 7485 true Chr3: 1682088-1689572 Arabidopsis thaliana
AT3G05700 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1684573-1689572 Arabidopsis thaliana
AT3G05700 5.0kb downstream 5.0kb downstream 7485 true Chr3: 1677088-1684572 Arabidopsis thaliana
AT3G05700 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1677088-1682087 Arabidopsis thaliana
AT3G05700 10.0kb upstream 10.0kb upstream 12485 true Chr3: 1682088-1694572 Arabidopsis thaliana
AT3G05700 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1684573-1694572 Arabidopsis thaliana
AT3G05700 10.0kb downstream 10.0kb downstream 12485 true Chr3: 1672088-1684572 Arabidopsis thaliana
AT3G05700 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1672088-1682087 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375894 5261 Brassicaceae View MSA
123840462 5264 Brassicales-Malvales View MSA
124351513 5266 SBM View MSA
124248070 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.226       High
cufflinks 5.57        
cufflinks 5.637        
cufflinks 5.329        
cufflinks 4.67       Low
cufflinks 5.685        

0 Strain