Gene : AT3G05350 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10804//PTHR10804:SF90 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // SUBFAMILY NOT NAMED Genomic Order:  493
Name:  ? AT3G05350 Secondary Identifier:  ? PAC:19659713
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05350 0.5kb upstream 0.5kb upstream 7405 true Chr3: 1526963-1534367 Arabidopsis thaliana
AT3G05350 0.5kb upstream 0.5kb upstream 500 false Chr3: 1533868-1534367 Arabidopsis thaliana
AT3G05350 0.5kb downstream 0.5kb downstream 7405 true Chr3: 1526463-1533867 Arabidopsis thaliana
AT3G05350 0.5kb downstream 0.5kb downstream 500 false Chr3: 1526463-1526962 Arabidopsis thaliana
AT3G05350 1.0kb upstream 1.0kb upstream 7905 true Chr3: 1526963-1534867 Arabidopsis thaliana
AT3G05350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1533868-1534867 Arabidopsis thaliana
AT3G05350 1.0kb downstream 1.0kb downstream 7905 true Chr3: 1525963-1533867 Arabidopsis thaliana
AT3G05350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1525963-1526962 Arabidopsis thaliana
AT3G05350 2.0kb upstream 2.0kb upstream 8905 true Chr3: 1526963-1535867 Arabidopsis thaliana
AT3G05350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1533868-1535867 Arabidopsis thaliana
AT3G05350 2.0kb downstream 2.0kb downstream 8905 true Chr3: 1524963-1533867 Arabidopsis thaliana
AT3G05350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1524963-1526962 Arabidopsis thaliana
AT3G05350 5.0kb upstream 5.0kb upstream 11905 true Chr3: 1526963-1538867 Arabidopsis thaliana
AT3G05350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1533868-1538867 Arabidopsis thaliana
AT3G05350 5.0kb downstream 5.0kb downstream 11905 true Chr3: 1521963-1533867 Arabidopsis thaliana
AT3G05350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1521963-1526962 Arabidopsis thaliana
AT3G05350 10.0kb upstream 10.0kb upstream 16905 true Chr3: 1526963-1543867 Arabidopsis thaliana
AT3G05350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1533868-1543867 Arabidopsis thaliana
AT3G05350 10.0kb downstream 10.0kb downstream 16905 true Chr3: 1516963-1533867 Arabidopsis thaliana
AT3G05350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1516963-1526962 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367433 5261 Brassicaceae View MSA
123841698 5264 Brassicales-Malvales View MSA
124344030 5266 SBM View MSA
124238268 5268 Malvidae View MSA
124063550 5270 Rosid View MSA
123740667 5271 Pentapetalae View MSA
122791513 5272 Eudicot View MSA
122044333 5273 Angiosperm View MSA
121348715 5274 Embryophyte View MSA
123426779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.903        
cufflinks 1.958        
cufflinks 10.832        
cufflinks 2.158        
cufflinks 10.035        
cufflinks 1.836        

0 Strain