Gene : AT3G05270 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  483
Name:  ? AT3G05270 Secondary Identifier:  ? PAC:19659672
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05270 0.5kb upstream 0.5kb upstream 3105 true Chr3: 1500803-1503907 Arabidopsis thaliana
AT3G05270 0.5kb upstream 0.5kb upstream 500 false Chr3: 1503408-1503907 Arabidopsis thaliana
AT3G05270 0.5kb downstream 0.5kb downstream 3105 true Chr3: 1500303-1503407 Arabidopsis thaliana
AT3G05270 0.5kb downstream 0.5kb downstream 500 false Chr3: 1500303-1500802 Arabidopsis thaliana
AT3G05270 1.0kb upstream 1.0kb upstream 3605 true Chr3: 1500803-1504407 Arabidopsis thaliana
AT3G05270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1503408-1504407 Arabidopsis thaliana
AT3G05270 1.0kb downstream 1.0kb downstream 3605 true Chr3: 1499803-1503407 Arabidopsis thaliana
AT3G05270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1499803-1500802 Arabidopsis thaliana
AT3G05270 2.0kb upstream 2.0kb upstream 4605 true Chr3: 1500803-1505407 Arabidopsis thaliana
AT3G05270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1503408-1505407 Arabidopsis thaliana
AT3G05270 2.0kb downstream 2.0kb downstream 4605 true Chr3: 1498803-1503407 Arabidopsis thaliana
AT3G05270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1498803-1500802 Arabidopsis thaliana
AT3G05270 5.0kb upstream 5.0kb upstream 7605 true Chr3: 1500803-1508407 Arabidopsis thaliana
AT3G05270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1503408-1508407 Arabidopsis thaliana
AT3G05270 5.0kb downstream 5.0kb downstream 7605 true Chr3: 1495803-1503407 Arabidopsis thaliana
AT3G05270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1495803-1500802 Arabidopsis thaliana
AT3G05270 10.0kb upstream 10.0kb upstream 12605 true Chr3: 1500803-1513407 Arabidopsis thaliana
AT3G05270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1503408-1513407 Arabidopsis thaliana
AT3G05270 10.0kb downstream 10.0kb downstream 12605 true Chr3: 1490803-1503407 Arabidopsis thaliana
AT3G05270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1490803-1500802 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365687 5261 Brassicaceae View MSA
123839144 5264 Brassicales-Malvales View MSA
124348232 5266 SBM View MSA
124250015 5268 Malvidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.907       High
cufflinks 6.693        
cufflinks 7.144        
cufflinks 6.784        
cufflinks 5.54       Low
cufflinks 8.583       High

0 Strain