Gene : AT3G05160 A. thaliana TAIR10
Defline:  (1 of 15) PTHR23500:SF62 - SUGAR TRANSPORTER ERD6-LIKE 14-RELATED Genomic Order:  470
Name:  ? AT3G05160 Secondary Identifier:  ? PAC:19663893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05160 0.5kb upstream 0.5kb upstream 4545 true Chr3: 1453106-1457650 Arabidopsis thaliana
AT3G05160 0.5kb upstream 0.5kb upstream 500 false Chr3: 1457151-1457650 Arabidopsis thaliana
AT3G05160 0.5kb downstream 0.5kb downstream 4545 true Chr3: 1452606-1457150 Arabidopsis thaliana
AT3G05160 0.5kb downstream 0.5kb downstream 500 false Chr3: 1452606-1453105 Arabidopsis thaliana
AT3G05160 1.0kb upstream 1.0kb upstream 5045 true Chr3: 1453106-1458150 Arabidopsis thaliana
AT3G05160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1457151-1458150 Arabidopsis thaliana
AT3G05160 1.0kb downstream 1.0kb downstream 5045 true Chr3: 1452106-1457150 Arabidopsis thaliana
AT3G05160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1452106-1453105 Arabidopsis thaliana
AT3G05160 2.0kb upstream 2.0kb upstream 6045 true Chr3: 1453106-1459150 Arabidopsis thaliana
AT3G05160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1457151-1459150 Arabidopsis thaliana
AT3G05160 2.0kb downstream 2.0kb downstream 6045 true Chr3: 1451106-1457150 Arabidopsis thaliana
AT3G05160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1451106-1453105 Arabidopsis thaliana
AT3G05160 5.0kb upstream 5.0kb upstream 9045 true Chr3: 1453106-1462150 Arabidopsis thaliana
AT3G05160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1457151-1462150 Arabidopsis thaliana
AT3G05160 5.0kb downstream 5.0kb downstream 9045 true Chr3: 1448106-1457150 Arabidopsis thaliana
AT3G05160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1448106-1453105 Arabidopsis thaliana
AT3G05160 10.0kb upstream 10.0kb upstream 14045 true Chr3: 1453106-1467150 Arabidopsis thaliana
AT3G05160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1457151-1467150 Arabidopsis thaliana
AT3G05160 10.0kb downstream 10.0kb downstream 14045 true Chr3: 1443106-1457150 Arabidopsis thaliana
AT3G05160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1443106-1453105 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330217 5261 Brassicaceae Singleton cluster - no MSA
123771480 5264 Brassicales-Malvales Singleton cluster - no MSA
124270008 5266 SBM Singleton cluster - no MSA
124126114 5268 Malvidae Singleton cluster - no MSA
124072523 5270 Rosid View MSA
123744368 5271 Pentapetalae View MSA
122794107 5272 Eudicot View MSA
122051255 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44        
cufflinks 1.525        
cufflinks 4.37        
cufflinks 1.849        
cufflinks 4.828       High
cufflinks 1.113       Low

0 Strain