Gene : AT3G04950 A. thaliana TAIR10
Defline:  (1 of 2) PF02810 - SEC-C motif (SEC-C) Genomic Order:  447
Name:  ? AT3G04950 Secondary Identifier:  ? PAC:19663760
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04950 0.5kb upstream 0.5kb upstream 2273 true Chr3: 1371205-1373477 Arabidopsis thaliana
AT3G04950 0.5kb upstream 0.5kb upstream 500 false Chr3: 1371205-1371704 Arabidopsis thaliana
AT3G04950 0.5kb downstream 0.5kb downstream 2273 true Chr3: 1371705-1373977 Arabidopsis thaliana
AT3G04950 0.5kb downstream 0.5kb downstream 500 false Chr3: 1373478-1373977 Arabidopsis thaliana
AT3G04950 1.0kb upstream 1.0kb upstream 2773 true Chr3: 1370705-1373477 Arabidopsis thaliana
AT3G04950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1370705-1371704 Arabidopsis thaliana
AT3G04950 1.0kb downstream 1.0kb downstream 2773 true Chr3: 1371705-1374477 Arabidopsis thaliana
AT3G04950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1373478-1374477 Arabidopsis thaliana
AT3G04950 2.0kb upstream 2.0kb upstream 3773 true Chr3: 1369705-1373477 Arabidopsis thaliana
AT3G04950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1369705-1371704 Arabidopsis thaliana
AT3G04950 2.0kb downstream 2.0kb downstream 3773 true Chr3: 1371705-1375477 Arabidopsis thaliana
AT3G04950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1373478-1375477 Arabidopsis thaliana
AT3G04950 5.0kb upstream 5.0kb upstream 6773 true Chr3: 1366705-1373477 Arabidopsis thaliana
AT3G04950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1366705-1371704 Arabidopsis thaliana
AT3G04950 5.0kb downstream 5.0kb downstream 6773 true Chr3: 1371705-1378477 Arabidopsis thaliana
AT3G04950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1373478-1378477 Arabidopsis thaliana
AT3G04950 10.0kb upstream 10.0kb upstream 11773 true Chr3: 1361705-1373477 Arabidopsis thaliana
AT3G04950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1361705-1371704 Arabidopsis thaliana
AT3G04950 10.0kb downstream 10.0kb downstream 11773 true Chr3: 1371705-1383477 Arabidopsis thaliana
AT3G04950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1373478-1383477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361757 5261 Brassicaceae View MSA
123833137 5264 Brassicales-Malvales View MSA
124338044 5266 SBM View MSA
124240780 5268 Malvidae View MSA
124067715 5270 Rosid View MSA
123737738 5271 Pentapetalae View MSA
122786470 5272 Eudicot View MSA
122045025 5273 Angiosperm View MSA
121346547 5274 Embryophyte View MSA
123380401 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.62        
cufflinks 2.835        
cufflinks 1.887       Low
cufflinks 2.842        
cufflinks 1.771       Low
cufflinks 2.948        

0 Strain