Gene : NHX2 A. thaliana TAIR10
Primary Identifier:  ? AT3G05030 Defline:  (1 of 3) PTHR10110//PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 1-RELATED
Genomic Order:  456 Name:  ? AT3G05030
Secondary Identifier:  ? PAC:19661842
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05030 0.5kb upstream 0.5kb upstream 4563 true Chr3: 1393296-1397858 Arabidopsis thaliana
AT3G05030 0.5kb upstream 0.5kb upstream 500 false Chr3: 1397359-1397858 Arabidopsis thaliana
AT3G05030 0.5kb downstream 0.5kb downstream 4563 true Chr3: 1392796-1397358 Arabidopsis thaliana
AT3G05030 0.5kb downstream 0.5kb downstream 500 false Chr3: 1392796-1393295 Arabidopsis thaliana
AT3G05030 1.0kb upstream 1.0kb upstream 5063 true Chr3: 1393296-1398358 Arabidopsis thaliana
AT3G05030 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1397359-1398358 Arabidopsis thaliana
AT3G05030 1.0kb downstream 1.0kb downstream 5063 true Chr3: 1392296-1397358 Arabidopsis thaliana
AT3G05030 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1392296-1393295 Arabidopsis thaliana
AT3G05030 2.0kb upstream 2.0kb upstream 6063 true Chr3: 1393296-1399358 Arabidopsis thaliana
AT3G05030 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1397359-1399358 Arabidopsis thaliana
AT3G05030 2.0kb downstream 2.0kb downstream 6063 true Chr3: 1391296-1397358 Arabidopsis thaliana
AT3G05030 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1391296-1393295 Arabidopsis thaliana
AT3G05030 5.0kb upstream 5.0kb upstream 9063 true Chr3: 1393296-1402358 Arabidopsis thaliana
AT3G05030 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1397359-1402358 Arabidopsis thaliana
AT3G05030 5.0kb downstream 5.0kb downstream 9063 true Chr3: 1388296-1397358 Arabidopsis thaliana
AT3G05030 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1388296-1393295 Arabidopsis thaliana
AT3G05030 10.0kb upstream 10.0kb upstream 14063 true Chr3: 1393296-1407358 Arabidopsis thaliana
AT3G05030 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1397359-1407358 Arabidopsis thaliana
AT3G05030 10.0kb downstream 10.0kb downstream 14063 true Chr3: 1383296-1397358 Arabidopsis thaliana
AT3G05030 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1383296-1393295 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381472 5261 Brassicaceae View MSA
123831937 5264 Brassicales-Malvales View MSA
124342094 5266 SBM View MSA
124245985 5268 Malvidae View MSA
124071378 5270 Rosid View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.987       High
cufflinks 3.796        
cufflinks 2.622       Low
cufflinks 4.468        
cufflinks 3.02        
cufflinks 3.391        

0 Strain