Gene : AT3G04830 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12760 - TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  430
Name:  ? AT3G04830 Secondary Identifier:  ? PAC:19662821
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04830 0.5kb upstream 0.5kb upstream 3638 true Chr3: 1325727-1329364 Arabidopsis thaliana
AT3G04830 0.5kb upstream 0.5kb upstream 500 false Chr3: 1325727-1326226 Arabidopsis thaliana
AT3G04830 0.5kb downstream 0.5kb downstream 3638 true Chr3: 1326227-1329864 Arabidopsis thaliana
AT3G04830 0.5kb downstream 0.5kb downstream 500 false Chr3: 1329365-1329864 Arabidopsis thaliana
AT3G04830 1.0kb upstream 1.0kb upstream 4138 true Chr3: 1325227-1329364 Arabidopsis thaliana
AT3G04830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1325227-1326226 Arabidopsis thaliana
AT3G04830 1.0kb downstream 1.0kb downstream 4138 true Chr3: 1326227-1330364 Arabidopsis thaliana
AT3G04830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1329365-1330364 Arabidopsis thaliana
AT3G04830 2.0kb upstream 2.0kb upstream 5138 true Chr3: 1324227-1329364 Arabidopsis thaliana
AT3G04830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1324227-1326226 Arabidopsis thaliana
AT3G04830 2.0kb downstream 2.0kb downstream 5138 true Chr3: 1326227-1331364 Arabidopsis thaliana
AT3G04830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1329365-1331364 Arabidopsis thaliana
AT3G04830 5.0kb upstream 5.0kb upstream 8138 true Chr3: 1321227-1329364 Arabidopsis thaliana
AT3G04830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1321227-1326226 Arabidopsis thaliana
AT3G04830 5.0kb downstream 5.0kb downstream 8138 true Chr3: 1326227-1334364 Arabidopsis thaliana
AT3G04830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1329365-1334364 Arabidopsis thaliana
AT3G04830 10.0kb upstream 10.0kb upstream 13138 true Chr3: 1316227-1329364 Arabidopsis thaliana
AT3G04830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1316227-1326226 Arabidopsis thaliana
AT3G04830 10.0kb downstream 10.0kb downstream 13138 true Chr3: 1326227-1339364 Arabidopsis thaliana
AT3G04830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1329365-1339364 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375270 5261 Brassicaceae View MSA
123833743 5264 Brassicales-Malvales View MSA
124350801 5266 SBM View MSA
124243588 5268 Malvidae View MSA
124068948 5270 Rosid View MSA
123741207 5271 Pentapetalae View MSA
122787866 5272 Eudicot View MSA
122047894 5273 Angiosperm View MSA
121346659 5274 Embryophyte View MSA
123424926 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.479        
cufflinks 5.366       Low
cufflinks 5.598        
cufflinks 6.251        
cufflinks 5.738        
cufflinks 6.753       High

0 Strain