Gene : AT3G04490 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12596:SF1 - EXPORTIN-4 Genomic Order:  392
Name:  ? AT3G04490 Secondary Identifier:  ? PAC:19663120
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04490 0.5kb upstream 0.5kb upstream 9728 true Chr3: 1200142-1209869 Arabidopsis thaliana
AT3G04490 0.5kb upstream 0.5kb upstream 500 false Chr3: 1200142-1200641 Arabidopsis thaliana
AT3G04490 0.5kb downstream 0.5kb downstream 9728 true Chr3: 1200642-1210369 Arabidopsis thaliana
AT3G04490 0.5kb downstream 0.5kb downstream 500 false Chr3: 1209870-1210369 Arabidopsis thaliana
AT3G04490 1.0kb upstream 1.0kb upstream 10228 true Chr3: 1199642-1209869 Arabidopsis thaliana
AT3G04490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1199642-1200641 Arabidopsis thaliana
AT3G04490 1.0kb downstream 1.0kb downstream 10228 true Chr3: 1200642-1210869 Arabidopsis thaliana
AT3G04490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1209870-1210869 Arabidopsis thaliana
AT3G04490 2.0kb upstream 2.0kb upstream 11228 true Chr3: 1198642-1209869 Arabidopsis thaliana
AT3G04490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1198642-1200641 Arabidopsis thaliana
AT3G04490 2.0kb downstream 2.0kb downstream 11228 true Chr3: 1200642-1211869 Arabidopsis thaliana
AT3G04490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1209870-1211869 Arabidopsis thaliana
AT3G04490 5.0kb upstream 5.0kb upstream 14228 true Chr3: 1195642-1209869 Arabidopsis thaliana
AT3G04490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1195642-1200641 Arabidopsis thaliana
AT3G04490 5.0kb downstream 5.0kb downstream 14228 true Chr3: 1200642-1214869 Arabidopsis thaliana
AT3G04490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1209870-1214869 Arabidopsis thaliana
AT3G04490 10.0kb upstream 10.0kb upstream 19228 true Chr3: 1190642-1209869 Arabidopsis thaliana
AT3G04490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1190642-1200641 Arabidopsis thaliana
AT3G04490 10.0kb downstream 10.0kb downstream 19228 true Chr3: 1200642-1219869 Arabidopsis thaliana
AT3G04490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1209870-1219869 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041048 5273 Angiosperm View MSA
122368044 5261 Brassicaceae View MSA
123832733 5264 Brassicales-Malvales View MSA
124344308 5266 SBM View MSA
124241971 5268 Malvidae View MSA
124065601 5270 Rosid View MSA
123736517 5271 Pentapetalae View MSA
122790322 5272 Eudicot View MSA
121344332 5274 Embryophyte View MSA
123425347 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.016        
cufflinks 5.475        
cufflinks 3.832        
cufflinks 5.669       High
cufflinks 3.847        
cufflinks 5.133        

0 Strain